Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RN7SKP224-201ENST00000364140 325 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-325P-201ENST00000411132 105 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 HSPD1P21-201ENST00000436541 245 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 OSTCP8-201ENST00000445117 448 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC009963.2-201ENST00000453431 138 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 HSPE1P6-201ENST00000479457 291 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 FO393415.2-201ENST00000480085 343 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC022493.1-201ENST00000492984 337 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC113155.1-201ENST00000511141 769 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU1-86P-201ENST00000516108 154 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-927P-201ENST00000516199 100 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU1-107P-201ENST00000516617 154 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AP005902.1-201ENST00000521358 186 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AP006289.1-201ENST00000538089 277 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC209154.1-201ENST00000582156 337 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR4273-201ENST00000582824 84 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC123912.5-201ENST00000605470 343 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 HMGB1P50-201ENST00000605814 607 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL591516.1-201ENST00000611326 274 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR6780A-201ENST00000615089 68 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR4272-201ENST00000635924 64 ntBASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1Q5Y7H0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
HLA-DQA1Q5Y7H0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC005183.1-201ENST00000603687 1979 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 Y_RNA.152-201ENST00000363578 100 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RNU6-596P-201ENST00000365395 98 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR1252-201ENST00000408861 65 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL590139.1-201ENST00000416267 400 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC108032.1-201ENST00000416706 207 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MTCO1P39-201ENST00000426148 480 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RPL23AP25-201ENST00000430973 463 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 SCARNA10-201ENST00000459255 330 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RNA5SP103-201ENST00000459503 118 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL591473.1-201ENST00000464297 313 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL049874.1-201ENST00000489560 388 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC008716.1-201ENST00000511084 513 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC007016.1-201ENST00000512110 244 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR5188-201ENST00000583467 113 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RN7SL52P-201ENST00000584271 284 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 Z98751.3-201ENST00000604447 521 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RN7SL722P-201ENST00000617780 284 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RN7SL565P-201ENST00000618246 284 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR6715B-201ENST00000637172 77 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 SALL4P2-201ENST00000423288 2910 ntBASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC093591.2-201ENST00000565254 3843 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 OR14L1P-202ENST00000641545 3009 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 Y_RNA.577-201ENST00000384794 101 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR192-201ENST00000384915 110 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 RNA5SP397-201ENST00000391323 118 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 SDHCP2-201ENST00000398565 501 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL513331.1-201ENST00000411908 397 ntBASIC4.26□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms