Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AL139039.1-201ENST00000401900 692 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RNA5SP118-201ENST00000410385 109 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 COX6B1P7-201ENST00000430845 235 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 SNRPEP9-201ENST00000436794 238 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 MRPS31P2-201ENST00000451581 518 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RPS7P7-201ENST00000463499 571 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RPL30P14-201ENST00000482744 348 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RPS23P1-201ENST00000491662 432 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC091885.1-201ENST00000506658 268 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 PRDX4P1-201ENST00000507189 574 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC093840.1-201ENST00000511599 336 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 LRRC34P2-201ENST00000514850 553 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RNA5SP165-201ENST00000517142 115 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 MTND4P7-201ENST00000523876 130 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 PSMA2P1-201ENST00000526365 646 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 MIR1273C-201ENST00000578669 77 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 MIR5047-201ENST00000579212 100 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC068790.4-201ENST00000602474 263 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC004805.2-201ENST00000605382 482 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AL020991.1-201ENST00000612314 373 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC068831.7-201ENST00000616954 363 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 uc_338.34-201ENST00000617467 174 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 AC004520.1-201ENST00000608362 1413 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 FTLP6-201ENST00000355274 422 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MIR383-201ENST00000362257 73 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 RNU6-373P-201ENST00000411247 98 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AC063979.1-201ENST00000415539 377 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 RPL36AP53-201ENST00000432891 316 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MTND3P16-201ENST00000452205 344 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AC012181.1-201ENST00000479895 423 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AC106782.4-201ENST00000568264 210 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MIR4425-201ENST00000580572 84 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MIR3609-201ENST00000582661 80 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MIR4424-201ENST00000585257 86 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AC010525.2-201ENST00000590920 195 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 FTX_3.1-201ENST00000610451 147 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AL136295.6-201ENST00000610486 658 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 SNORD39.4-201ENST00000620099 78 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MIR3653-201ENST00000625572 110 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 OR4G1P-203ENST00000641984 1631 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 MAPK10-373ENST00000641983 6772 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 AL136164.4-201ENST00000625013 2135 ntBASIC3.76□□□□□ -1.81
RNF220Q5VTB9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RNF220Q5VTB9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RNU4-66P-201ENST00000365199 138 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 U3.22-201ENST00000391120 215 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms