Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 MIR3122-201ENST00000577243 73 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AP001486.3-201ENST00000615334 372 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 MIR1197-201ENST00000408818 88 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 TATDN1P1-201ENST00000414123 891 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 SNRPFP2-201ENST00000440710 251 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 Z69720.2-201ENST00000624755 279 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 MTATP6P4-201ENST00000427725 675 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AC079780.1-201ENST00000428259 207 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 USP12PX-201ENST00000432383 1057 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 SUMO2P2-201ENST00000456482 255 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AC087343.1-201ENST00000477341 475 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 VN1R84P-201ENST00000593697 235 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AC096772.1-201ENST00000609146 564 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 CLIC4P1-201ENST00000453177 535 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 HMGN2P16-201ENST00000456802 261 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 MIR4287-201ENST00000579398 78 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 AL136363.1-201ENST00000605349 337 ntBASIC0.59□□□□□ -2.31
VPS13DQ5THJ4 SNORA7.2-201ENST00000364446 145 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC012497.1-201ENST00000429392 575 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 RNU1-98P-201ENST00000458992 160 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 SNORD97-201ENST00000459187 142 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC005908.1-201ENST00000468701 347 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 RPS27P23-201ENST00000487608 251 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 SYF2P1-201ENST00000550658 413 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC024619.4-201ENST00000580924 316 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AL355297.2-201ENST00000604792 129 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC109809.1-201ENST00000619665 545 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AL445687.1-201ENST00000439946 251 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 AC010683.1-201ENST00000473673 378 ntBASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.59□□□□□ -2.32
VPS13DQ5THJ4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 RNU6-1077P-201ENST00000410506 102 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 RNA5SP395-201ENST00000516567 118 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC036111.3-201ENST00000526389 112 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AL031775.1-201ENST00000607014 887 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 MIR8087-201ENST00000612745 78 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC099548.1-201ENST00000421443 426 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC078857.1-201ENST00000469870 667 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 EIF4EP5-201ENST00000528228 640 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 OR5B19P-201ENST00000531766 928 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC010200.2-201ENST00000605098 235 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AL050343.2-201ENST00000607338 280 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 HMGN2P10-201ENST00000448085 265 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 DYNLL1P5-201ENST00000467158 270 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 RNU1-61P-201ENST00000516107 151 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 IMMP1LP2-201ENST00000552954 492 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 AC078899.2-201ENST00000595282 212 ntBASIC0.58□□□□□ -2.32
VPS13DQ5THJ4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 RNU6-50P-201ENST00000362356 103 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC079776.3-201ENST00000450665 370 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 MTCO2P32-201ENST00000514865 403 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 CR382285.2-201ENST00000624662 1495 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 SNORA14A-201ENST00000364773 135 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 RNU6-1181P-201ENST00000384191 106 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 RPL31P52-201ENST00000407532 367 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC093716.1-201ENST00000435923 377 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 LINC00933-203ENST00000559812 219 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms