Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 AP006289.1-201ENST00000538089 277 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 TRAV28-201ENST00000557548 323 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 MIR7853-201ENST00000584820 132 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 AL591926.8-201ENST00000616876 211 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.23-201ENST00000362496 106 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U3.3-201ENST00000362986 216 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU4-11P-201ENST00000365287 132 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.542-201ENST00000384641 111 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RPS16P5-201ENST00000406501 404 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 HSPE1P8-201ENST00000406997 288 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU2-2P-201ENST00000410396 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 Z95327.1-201ENST00000446082 482 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC073264.2-201ENST00000448886 166 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC010733.1-201ENST00000451515 401 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC005840.1-201ENST00000498412 377 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 ENPP7P11-201ENST00000505915 627 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU6-659P-201ENST00000516454 104 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU7-110P-201ENST00000516891 62 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC136624.4-201ENST00000573044 370 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 MIR5692A1-201ENST00000580523 69 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AC123912.5-201ENST00000605470 343 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU2-4P-201ENST00000606190 192 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.15-201ENST00000611544 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.16-201ENST00000613119 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.12-201ENST00000613778 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.9-201ENST00000615427 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.11-201ENST00000616345 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.2-201ENST00000616535 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.3-201ENST00000617785 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.19-201ENST00000618602 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNU2-1-201ENST00000618664 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.6-201ENST00000619225 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.5-201ENST00000619465 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 U2.10-201ENST00000620268 191 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 RAD17P1-201ENST00000418130 2042 ntBASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTC1Q2NKJ3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RNU6-1301P-201ENST00000362724 104 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RNU6-653P-201ENST00000363074 106 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RNU6-288P-201ENST00000363690 104 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC068538.1-201ENST00000376856 336 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RNU6-637P-201ENST00000384050 107 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 MIR105-1-201ENST00000385222 81 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 MIR513C-201ENST00000401352 84 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 MIR1182-201ENST00000408363 97 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC119751.6-201ENST00000416712 186 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RPS15AP40-201ENST00000419621 391 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC009237.7-201ENST00000447357 229 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AL356981.1-201ENST00000454879 684 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RN7SKP210-201ENST00000459176 261 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 RNU6-1037P-201ENST00000459571 107 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.706-201ENST00000516933 99 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC115990.1-201ENST00000526957 301 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 DEFB131C-201ENST00000528817 165 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 MIR5692C2-201ENST00000577959 77 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 PRPF19P1-201ENST00000584766 898 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 AC139769.1-204ENST00000472297 1931 ntBASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms