Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 MIR767-201ENST00000390228 109 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC119751.3-201ENST00000399720 670 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AL445669.1-201ENST00000426743 755 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 SUMO1P4-201ENST00000429430 302 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 RPL26P6-201ENST00000440913 438 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AP000542.1-201ENST00000448473 371 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 RNU7-23P-201ENST00000459465 62 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC104563.1-201ENST00000476147 376 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC098799.2-201ENST00000509466 868 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 SNORA31.18-201ENST00000517043 134 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AP003497.1-201ENST00000528472 562 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AP003461.1-201ENST00000528866 78 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AMZ2P1-203ENST00000565833 850 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 MIR4999-201ENST00000585029 91 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AL353997.4-201ENST00000586196 166 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AL357094.1-201ENST00000603845 844 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AL359198.2-201ENST00000611836 194 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC140725.3-201ENST00000616193 880 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC012321.1-201ENST00000561622 1588 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 ELF2P3-201ENST00000445099 1506 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC069528.2-201ENST00000624849 1991 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 RNA5SP88-201ENST00000365560 109 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC133134.1-201ENST00000466800 359 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC021382.1-201ENST00000483523 359 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-798P-201ENST00000516912 103 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC013828.2-201ENST00000532487 235 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC007336.1-201ENST00000576365 3828 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AL353778.1-201ENST00000603149 408 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AL139344.1-201ENST00000605228 195 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-88P-201ENST00000606801 100 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC004067.1-201ENST00000608733 700 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC063944.3-201ENST00000609969 533 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 AC017037.3-201ENST00000625016 472 ntBASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM1Q2M3G4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC005832.2-201ENST00000538921 1430 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-660P-201ENST00000364566 109 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 MTCO1P17-201ENST00000411522 491 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 Z98742.3-201ENST00000418637 326 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC009237.8-201ENST00000445492 379 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 SNORD121B-201ENST00000458838 81 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AL049874.1-201ENST00000489560 388 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 SNORA3.4-201ENST00000515969 96 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC025881.1-201ENST00000518851 512 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 ZNF321P-202ENST00000550843 495 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AL355836.1-201ENST00000555951 870 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC103810.1-201ENST00000579873 453 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AP000787.2-201ENST00000604432 568 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC046143.2-201ENST00000609789 160 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 CTSLP2-204ENST00000629029 392 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC007671.2-201ENST00000637344 619 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 AC099063.3-201ENST00000642066 185 ntBASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM1Q2M3G4 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms