Protein–RNA interactions for Protein: Q15858

SCN9A, Sodium channel protein type 9 subunit alpha, humanhuman

Predictions only

Length 1,988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9AQ15858 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN9AQ15858 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN9AQ15858 AC093519.1-201ENST00000566109 298 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 AC023824.3-201ENST00000569003 562 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 OR4K8P-201ENST00000578842 1048 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 AL031176.1-201ENST00000604554 466 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 AC106900.2-201ENST00000604994 317 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 AP002826.1-201ENST00000608835 315 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 MTND5P35-201ENST00000557537 1720 ntBASIC1.82□□□□□ -2.12
SCN9AQ15858 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SCN9AQ15858 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN9AQ15858 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 U3.29-201ENST00000391296 212 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 RNF2P1-201ENST00000442955 1010 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 MTCO1P48-201ENST00000448024 1096 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 NDUFA5P7-201ENST00000452914 242 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC080013.2-201ENST00000460866 323 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 PABPC1P3-201ENST00000469174 459 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC084024.2-201ENST00000503480 791 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AC112518.2-201ENST00000508565 425 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN9AQ15858 MIR5194-201ENST00000582634 120 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 MIR3616-201ENST00000584070 92 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN9AQ15858 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SCN9AQ15858 OR5H6-203ENST00000642105 978 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AC131280.1-202ENST00000624067 4211 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.81□□□□□ -2.12
SCN9AQ15858 U8.1-201ENST00000362843 134 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 RNU6-1066P-201ENST00000363573 105 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 RNU2-28P-201ENST00000410457 189 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AC092047.1-201ENST00000424997 240 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 DEFB130D-201ENST00000426866 237 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AL354695.1-201ENST00000427935 228 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN9AQ15858 RPL31P54-201ENST00000429803 370 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 IFNA20P-201ENST00000436840 528 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AL353691.1-201ENST00000451332 387 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 MRPL42P4-201ENST00000453267 443 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 Z82190.1-201ENST00000454534 490 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC121161.1-201ENST00000510606 652 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN9AQ15858 AC105224.1-201ENST00000587055 421 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 AL449363.1-201ENST00000617815 186 ntBASIC1.81□□□□□ -2.12
SCN9AQ15858 SDAD1P2-201ENST00000441308 2028 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 RPS3AP24-201ENST00000407896 734 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AL158050.1-201ENST00000416077 457 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 TAF13P2-201ENST00000416876 286 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 Z75741.2-201ENST00000417272 1167 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN9AQ15858 RPL27AP8-201ENST00000424277 446 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AL139109.1-201ENST00000455491 297 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 RPS29P29-201ENST00000456396 171 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 snoU13.28-201ENST00000459235 104 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 COX7A2P2-201ENST00000505291 250 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC008127.2-201ENST00000549925 1075 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AL138976.2-201ENST00000563989 694 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
SCN9AQ15858 AC091946.2-201ENST00000606105 291 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AC020658.4-201ENST00000613987 684 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AL354696.1-201ENST00000614652 497 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 AL353770.2-201ENST00000620024 78 ntBASIC1.8□□□□□ -2.12
SCN9AQ15858 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN9AQ15858 DEFB108F-201ENST00000344638 222 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 RNU1-105P-201ENST00000363470 161 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 SNORA6-201ENST00000384033 151 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 U3.40-201ENST00000408706 208 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN9AQ15858 GTF2IP7-202ENST00000436677 309 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC009296.1-201ENST00000443146 155 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AL121871.1-201ENST00000443413 436 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 SUMO2P2-201ENST00000456482 255 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 AC118282.2-201ENST00000508739 374 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 RNU5A-7P-201ENST00000515979 116 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 RNA5SP102-201ENST00000516865 106 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 SNORA76.2-201ENST00000517095 137 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC026616.1-201ENST00000523157 525 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 SUB1P1-201ENST00000524415 382 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 DEFB108D-201ENST00000527787 222 ntBASIC1.79□□□□□ -2.12
SCN9AQ15858 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN9AQ15858 DUXAP9-208ENST00000622815 614 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms