Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC013476.2-201ENST00000614456 459 ntBASIC3.74□□□□□ -1.81
DDR1Q08345 AL355810.1-201ENST00000614629 552 ntBASIC3.74□□□□□ -1.81
DDR1Q08345 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.74□□□□□ -1.81
DDR1Q08345 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.74□□□□□ -1.81
DDR1Q08345 AC092447.7-201ENST00000422212 1621 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 AC007496.3-201ENST00000624987 3443 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 AL136164.4-201ENST00000625013 2135 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
DDR1Q08345 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
DDR1Q08345 RNU6-289P-201ENST00000364093 107 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 Y_RNA.248-201ENST00000364501 109 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 SNORD115.1-201ENST00000391109 76 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 RNU2-52P-201ENST00000410680 190 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 MTND1P21-201ENST00000412991 285 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 MTCO2P19-201ENST00000427513 598 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC104651.1-201ENST00000427559 735 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 MYL8P-204ENST00000431574 518 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 OR2B8P-201ENST00000432841 938 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 FTH1P1-201ENST00000437933 532 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC009969.1-201ENST00000438726 172 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.73□□□□□ -1.81
DDR1Q08345 AC002381.1-201ENST00000447049 280 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.73□□□□□ -1.81
DDR1Q08345 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.73□□□□□ -1.81
DDR1Q08345 BX322784.1-201ENST00000455793 1077 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 OR6K1P-201ENST00000456766 971 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 LARP1BP2-201ENST00000486594 519 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC114967.1-201ENST00000504890 259 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 SCARNA20.6-201ENST00000517251 106 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.73□□□□□ -1.81
DDR1Q08345 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.73□□□□□ -1.81
DDR1Q08345 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 AC245505.1-201ENST00000556398 224 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC009063.1-201ENST00000563342 702 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AC090615.1-201ENST00000577519 154 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 MIR4435-1-201ENST00000582552 80 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.73□□□□□ -1.81
DDR1Q08345 AL353997.4-201ENST00000586196 166 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 AC016727.1-205ENST00000605437 569 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 AC243829.7-201ENST00000633081 225 ntBASIC3.73□□□□□ -1.81
DDR1Q08345 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.73□□□□□ -1.81
DDR1Q08345 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.73□□□□□ -1.81
DDR1Q08345 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDR1Q08345 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDR1Q08345 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
DDR1Q08345 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
DDR1Q08345 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DDR1Q08345 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDR1Q08345 Y_RNA.303-201ENST00000364998 94 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 AC092447.6-201ENST00000414578 210 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.72□□□□□ -1.81
DDR1Q08345 AC019097.1-201ENST00000424783 735 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.72□□□□□ -1.81
DDR1Q08345 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DDR1Q08345 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.72□□□□□ -1.81
DDR1Q08345 AP000542.1-201ENST00000448473 371 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.72□□□□□ -1.81
DDR1Q08345 HMGB1P36-201ENST00000487709 576 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 AC116353.2-201ENST00000505332 712 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 AC034159.1-201ENST00000513885 583 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 RNU4-29P-201ENST00000515943 174 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 RNU1-41P-201ENST00000516161 162 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 RNU1-48P-201ENST00000516400 162 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 RNU6-1003P-201ENST00000517099 105 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 AC022878.1-201ENST00000530684 149 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DDR1Q08345 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
DDR1Q08345 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.72□□□□□ -1.81
DDR1Q08345 MIR548S-201ENST00000581352 82 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.72□□□□□ -1.81
DDR1Q08345 AC007318.2-201ENST00000620999 243 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDR1Q08345 AC138915.3-201ENST00000562908 1389 ntBASIC3.72□□□□□ -1.81
DDR1Q08345 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
DDR1Q08345 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
DDR1Q08345 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
DDR1Q08345 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDR1Q08345 MIR148B-201ENST00000362252 99 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 RNU5F-7P-201ENST00000363696 115 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 Y_RNA.390-201ENST00000383932 102 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 MIR320C1-201ENST00000408566 88 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 Y_RNA.598-201ENST00000410480 95 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 NDUFB4P5-201ENST00000415445 361 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.71□□□□□ -1.82
DDR1Q08345 AL590233.1-201ENST00000430017 456 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.71□□□□□ -1.82
DDR1Q08345 AC087499.2-201ENST00000432861 149 ntBASIC3.71□□□□□ -1.82
DDR1Q08345 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms