Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR9-3-201ENST00000385084 90 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 CISD1P1-201ENST00000393907 327 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC068050.1-201ENST00000394891 380 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 HMGB1P17-201ENST00000403495 628 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AL033519.2-201ENST00000403958 392 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 RNU4-26P-201ENST00000410270 107 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 RPL23AP39-201ENST00000415533 405 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 BEND7P1-201ENST00000422058 457 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 RPL30P4-201ENST00000429309 333 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AL645568.3-201ENST00000433683 316 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 USP9YP15-201ENST00000442391 422 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AL360221.1-201ENST00000445989 335 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 MTCO1P48-201ENST00000448024 1096 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC068587.2-201ENST00000478386 781 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 HMGB1P36-201ENST00000487709 576 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 SNORA31.6-201ENST00000516241 130 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 YWHAZP1-201ENST00000556286 722 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC012435.1-202ENST00000568772 240 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 PISRT1-201ENST00000626175 531 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 AC083865.1-201ENST00000636634 831 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 OR4G11P-202ENST00000642116 1414 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 RNU6-819P-201ENST00000364116 107 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 RNU6-152P-201ENST00000384037 107 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 RN7SKP51-201ENST00000410781 304 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 OR9R1P-201ENST00000412200 877 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 SNORA59A-201ENST00000459326 152 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC104564.1-201ENST00000493028 407 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 RPS29P11-201ENST00000496507 171 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC109471.1-201ENST00000511631 612 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC093752.1-206ENST00000511823 336 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC022483.1-201ENST00000514020 567 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 RNA5SP182-201ENST00000516064 82 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC104997.1-201ENST00000519761 717 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 GNAI2P1-201ENST00000541815 315 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AL354943.1-201ENST00000572103 781 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC104581.2-201ENST00000572227 430 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H1AQ02539 VN1R88P-201ENST00000596787 292 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 SEPT7P9-203ENST00000604116 343 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 BNIP3P4-201ENST00000604946 565 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 AC084768.2-201ENST00000622736 221 ntBASIC1.29□□□□□ -2.2
HIST1H1AQ02539 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 U3.13-201ENST00000364804 214 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MIR7-1-201ENST00000384871 110 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MIR23A-201ENST00000385245 73 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MIR1294-201ENST00000408503 142 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 RNU6-1140P-201ENST00000410517 106 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 OR51A3P-201ENST00000413596 924 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 RPS24P7-201ENST00000416921 246 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 BX276092.3-201ENST00000424182 230 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MTCO3P2-201ENST00000457365 171 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AP005435.4-201ENST00000529514 284 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AP000403.1-201ENST00000603349 851 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 RPAP2P1-201ENST00000603626 1168 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AL031176.1-201ENST00000604554 466 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AP000238.1-201ENST00000608759 426 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 GDI2P1-201ENST00000429312 1336 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 AC025263.3-201ENST00000622965 1396 ntBASIC1.28□□□□□ -2.2
HIST1H1AQ02539 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HIST1H1AQ02539 MIR126-201ENST00000362291 85 ntBASIC1.27□□□□□ -2.21
HIST1H1AQ02539 SNORD114-1-201ENST00000362705 72 ntBASIC1.27□□□□□ -2.21
HIST1H1AQ02539 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HIST1H1AQ02539 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HIST1H1AQ02539 AL121978.1-201ENST00000402778 359 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms