Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 AL359273.1-201ENST00000510918 627 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.54□□□□□ -1.84
RAE1P78406 RNU6-123P-201ENST00000516163 102 ntBASIC3.54□□□□□ -1.84
RAE1P78406 SNORA31.8-201ENST00000516327 108 ntBASIC3.54□□□□□ -1.84
RAE1P78406 SCARNA15.2-201ENST00000516409 127 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.54□□□□□ -1.84
RAE1P78406 MTND4P7-201ENST00000523876 130 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.54□□□□□ -1.84
RAE1P78406 AC023050.3-201ENST00000541142 333 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC007224.1-201ENST00000564410 144 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC053481.4-201ENST00000583164 216 ntBASIC3.54□□□□□ -1.84
RAE1P78406 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AL354798.1-201ENST00000622505 329 ntBASIC3.54□□□□□ -1.84
RAE1P78406 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.54□□□□□ -1.84
RAE1P78406 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.54□□□□□ -1.84
RAE1P78406 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAE1P78406 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RAE1P78406 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.53□□□□□ -1.84
RAE1P78406 RNU6-845P-201ENST00000362578 103 ntBASIC3.53□□□□□ -1.84
RAE1P78406 RNU6-522P-201ENST00000364497 107 ntBASIC3.53□□□□□ -1.84
RAE1P78406 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
RAE1P78406 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.53□□□□□ -1.84
RAE1P78406 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RAE1P78406 AL391417.1-201ENST00000404100 426 ntBASIC3.53□□□□□ -1.84
RAE1P78406 RNU4-26P-201ENST00000410270 107 ntBASIC3.53□□□□□ -1.84
RAE1P78406 BX323014.1-201ENST00000412876 237 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AC080125.1-201ENST00000414888 684 ntBASIC3.53□□□□□ -1.84
RAE1P78406 MTCO3P46-201ENST00000425787 232 ntBASIC3.53□□□□□ -1.84
RAE1P78406 HMGB1P27-201ENST00000431429 603 ntBASIC3.53□□□□□ -1.84
RAE1P78406 PRDX3P3-201ENST00000447765 522 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AC104058.1-201ENST00000448028 297 ntBASIC3.53□□□□□ -1.84
RAE1P78406 RN7SL385P-201ENST00000468873 276 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
RAE1P78406 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.53□□□□□ -1.84
RAE1P78406 Y_RNA.665-201ENST00000516177 98 ntBASIC3.53□□□□□ -1.84
RAE1P78406 RNU6-1314P-201ENST00000517139 104 ntBASIC3.53□□□□□ -1.84
RAE1P78406 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RAE1P78406 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.53□□□□□ -1.84
RAE1P78406 OR8R1P-201ENST00000543943 764 ntBASIC3.53□□□□□ -1.84
RAE1P78406 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
RAE1P78406 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.53□□□□□ -1.84
RAE1P78406 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.53□□□□□ -1.84
RAE1P78406 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
RAE1P78406 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
RAE1P78406 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.53□□□□□ -1.84
RAE1P78406 KLKP1-201ENST00000595979 403 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AL138889.2-201ENST00000603883 242 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AP002826.1-201ENST00000608835 315 ntBASIC3.53□□□□□ -1.84
RAE1P78406 AC069234.5-201ENST00000611056 416 ntBASIC3.53□□□□□ -1.84
RAE1P78406 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.53□□□□□ -1.84
RAE1P78406 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RAE1P78406 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAE1P78406 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAE1P78406 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
RAE1P78406 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RAE1P78406 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RAE1P78406 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.53□□□□□ -1.85
RAE1P78406 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.85
RAE1P78406 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 Y_RNA.100-201ENST00000363141 102 ntBASIC3.52□□□□□ -1.85
RAE1P78406 U3.12-201ENST00000364498 214 ntBASIC3.52□□□□□ -1.85
RAE1P78406 Y_RNA.263-201ENST00000364659 114 ntBASIC3.52□□□□□ -1.85
RAE1P78406 EEF1A1P40-201ENST00000412883 573 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AC092809.3-201ENST00000415453 231 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 NDUFB4P7-201ENST00000423198 363 ntBASIC3.52□□□□□ -1.85
RAE1P78406 RPL27AP8-201ENST00000424277 446 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
RAE1P78406 MTND3P23-201ENST00000431980 347 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AL591212.2-201ENST00000433923 257 ntBASIC3.52□□□□□ -1.85
RAE1P78406 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 AL121877.1-201ENST00000453704 622 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AC087588.1-201ENST00000462203 316 ntBASIC3.52□□□□□ -1.85
RAE1P78406 TRBV1-201ENST00000476502 284 ntBASIC3.52□□□□□ -1.85
RAE1P78406 CCDC34P1-201ENST00000507441 517 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.52□□□□□ -1.85
RAE1P78406 Y_RNA.689-201ENST00000516589 107 ntBASIC3.52□□□□□ -1.85
RAE1P78406 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
RAE1P78406 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.52□□□□□ -1.85
RAE1P78406 AC007991.1-201ENST00000522680 631 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 AP004242.1-201ENST00000533701 349 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 MIR5583-1-201ENST00000580941 59 ntBASIC3.52□□□□□ -1.85
RAE1P78406 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
RAE1P78406 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.52□□□□□ -1.85
RAE1P78406 MIR6810-201ENST00000622701 70 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms