Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL121652.1-201ENST00000608851 448 ntBASIC2.48□□□□□ -2.01
CDH4P55283 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH4P55283 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.48□□□□□ -2.01
CDH4P55283 AC107075.1-201ENST00000613695 314 ntBASIC2.48□□□□□ -2.01
CDH4P55283 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH4P55283 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
CDH4P55283 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CDH4P55283 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH4P55283 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH4P55283 AC135776.4-201ENST00000624300 1904 ntBASIC2.48□□□□□ -2.01
CDH4P55283 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH4P55283 AC069528.2-201ENST00000624849 1991 ntBASIC2.47□□□□□ -2.01
CDH4P55283 RNU6-223P-201ENST00000362830 107 ntBASIC2.47□□□□□ -2.01
CDH4P55283 MIR620-201ENST00000385232 95 ntBASIC2.47□□□□□ -2.01
CDH4P55283 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH4P55283 NANOGP5-201ENST00000424456 877 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH4P55283 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH4P55283 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH4P55283 AC005410.1-202ENST00000460347 485 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC133134.1-201ENST00000466800 359 ntBASIC2.47□□□□□ -2.01
CDH4P55283 RN7SL636P-201ENST00000497504 294 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC021146.8-201ENST00000507455 733 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC234781.5-201ENST00000508429 271 ntBASIC2.47□□□□□ -2.01
CDH4P55283 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH4P55283 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
CDH4P55283 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH4P55283 AP003122.3-201ENST00000526316 255 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC021269.2-201ENST00000532318 330 ntBASIC2.47□□□□□ -2.01
CDH4P55283 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH4P55283 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH4P55283 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH4P55283 MTCYBP23-201ENST00000558717 1102 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC023813.2-201ENST00000564321 469 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AP001269.3-201ENST00000588718 329 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
CDH4P55283 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH4P55283 AC091057.3-201ENST00000602684 733 ntBASIC2.47□□□□□ -2.01
CDH4P55283 AC068057.2-201ENST00000624047 895 ntBASIC2.47□□□□□ -2.01
CDH4P55283 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
CDH4P55283 SNORD116.1-201ENST00000365628 92 ntBASIC2.46□□□□□ -2.02
CDH4P55283 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 ANAPC10P1-201ENST00000395991 556 ntBASIC2.46□□□□□ -2.02
CDH4P55283 MIR888-201ENST00000401186 77 ntBASIC2.46□□□□□ -2.02
CDH4P55283 MIR320C1-201ENST00000408566 88 ntBASIC2.46□□□□□ -2.02
CDH4P55283 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH4P55283 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH4P55283 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH4P55283 BTF3L4P3-201ENST00000418879 476 ntBASIC2.46□□□□□ -2.02
CDH4P55283 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH4P55283 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH4P55283 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH4P55283 TPT1P14-201ENST00000448018 505 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 EEF1B2P7-201ENST00000451177 676 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AC128713.1-201ENST00000471495 306 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AL160314.1-201ENST00000490836 438 ntBASIC2.46□□□□□ -2.02
CDH4P55283 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH4P55283 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.46□□□□□ -2.02
CDH4P55283 SCARNA17.1-201ENST00000516211 143 ntBASIC2.46□□□□□ -2.02
CDH4P55283 SCARNA17.2-201ENST00000516334 143 ntBASIC2.46□□□□□ -2.02
CDH4P55283 RNA5SP290-201ENST00000517133 127 ntBASIC2.46□□□□□ -2.02
CDH4P55283 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH4P55283 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH4P55283 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH4P55283 AC060771.1-201ENST00000582031 164 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
CDH4P55283 AL133445.2-201ENST00000611191 527 ntBASIC2.46□□□□□ -2.02
CDH4P55283 SCARNA17.4-201ENST00000614296 143 ntBASIC2.46□□□□□ -2.02
CDH4P55283 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH4P55283 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.46□□□□□ -2.02
CDH4P55283 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH4P55283 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH4P55283 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDH4P55283 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH4P55283 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH4P55283 AC009902.3-201ENST00000606235 2172 ntBASIC2.45□□□□□ -2.02
CDH4P55283 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH4P55283 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
CDH4P55283 RN7SKP226-201ENST00000364912 300 ntBASIC2.45□□□□□ -2.02
CDH4P55283 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CDH4P55283 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH4P55283 RNU4-22P-201ENST00000411058 166 ntBASIC2.45□□□□□ -2.02
CDH4P55283 AC023141.4-201ENST00000412031 328 ntBASIC2.45□□□□□ -2.02
CDH4P55283 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH4P55283 MTCO3P45-201ENST00000443036 613 ntBASIC2.45□□□□□ -2.02
CDH4P55283 USP9YP10-201ENST00000454868 628 ntBASIC2.45□□□□□ -2.02
CDH4P55283 snoU109.3-201ENST00000459477 145 ntBASIC2.45□□□□□ -2.02
CDH4P55283 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH4P55283 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH4P55283 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH4P55283 AC010486.1-201ENST00000511793 424 ntBASIC2.45□□□□□ -2.02
CDH4P55283 TBCAP3-201ENST00000512475 312 ntBASIC2.45□□□□□ -2.02
CDH4P55283 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.45□□□□□ -2.02
CDH4P55283 SNORA31.18-201ENST00000517043 134 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms