Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.13□□□□□ -2.23
CLTCL1P53675 AC025263.3-201ENST00000622965 1396 ntBASIC1.13□□□□□ -2.23
CLTCL1P53675 DEFB108F-201ENST00000344638 222 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 Y_RNA.68-201ENST00000362881 102 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 RNU6-1072P-201ENST00000384703 107 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 RNU6-443P-201ENST00000384780 107 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 CR848007.2-201ENST00000424918 787 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 EIF4EP3-201ENST00000498782 656 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CLTCL1P53675 RNA5SP476-201ENST00000516613 103 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.12□□□□□ -2.23
CLTCL1P53675 AP001180.3-201ENST00000582221 145 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 MIR4658-201ENST00000584344 65 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 AP001486.3-201ENST00000615334 372 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 MIR6513-201ENST00000621188 64 ntBASIC1.12□□□□□ -2.23
CLTCL1P53675 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLTCL1P53675 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.11□□□□□ -2.23
CLTCL1P53675 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CLTCL1P53675 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.11□□□□□ -2.23
CLTCL1P53675 XKRYP1-201ENST00000423438 492 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 XKRYP2-201ENST00000432915 492 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.11□□□□□ -2.23
CLTCL1P53675 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CLTCL1P53675 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 RNU6-492P-201ENST00000363035 104 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 AC013268.2-201ENST00000420753 337 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.11□□□□□ -2.23
CLTCL1P53675 AC087465.1-201ENST00000560574 245 ntBASIC1.11□□□□□ -2.23
CLTCL1P53675 Y_RNA.258-201ENST00000364613 105 ntBASIC1.1□□□□□ -2.23
CLTCL1P53675 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.1□□□□□ -2.23
CLTCL1P53675 AC078857.1-201ENST00000469870 667 ntBASIC1.1□□□□□ -2.23
CLTCL1P53675 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.1□□□□□ -2.23
CLTCL1P53675 RRN3P3-201ENST00000549207 578 ntBASIC1.1□□□□□ -2.23
CLTCL1P53675 AC109454.4-201ENST00000623411 649 ntBASIC1.1□□□□□ -2.23
CLTCL1P53675 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLTCL1P53675 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.1□□□□□ -2.23
CLTCL1P53675 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CLTCL1P53675 SNORA14A-201ENST00000364773 135 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 CIR1P3-201ENST00000405137 479 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 PRELID3BP11-201ENST00000414230 479 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 UBE2FP1-201ENST00000416536 447 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.09□□□□□ -2.23
CLTCL1P53675 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.09□□□□□ -2.23
CLTCL1P53675 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.09□□□□□ -2.23
CLTCL1P53675 Y_RNA.681-201ENST00000516445 113 ntBASIC1.09□□□□□ -2.23
CLTCL1P53675 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.09□□□□□ -2.23
CLTCL1P53675 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CLTCL1P53675 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.09□□□□□ -2.24
CLTCL1P53675 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLTCL1P53675 CCNB2P1-201ENST00000399411 1150 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 MIR936-201ENST00000401264 98 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC093716.1-201ENST00000435923 377 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 RPS24P6-201ENST00000452670 400 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 RPS27P26-201ENST00000494583 239 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC022447.3-201ENST00000506865 495 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 MTCO2P32-201ENST00000514865 403 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC112198.4-201ENST00000515450 351 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.08□□□□□ -2.24
CLTCL1P53675 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC091925.1-201ENST00000623204 462 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
CLTCL1P53675 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLTCL1P53675 AC244636.1-201ENST00000421152 228 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 RPL7P34-201ENST00000433316 712 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 MTND2P2-201ENST00000434633 945 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 Z80107.1-201ENST00000436830 412 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLTCL1P53675 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.07□□□□□ -2.24
CLTCL1P53675 RNU1-61P-201ENST00000516107 151 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 RNA5SP108-201ENST00000605921 117 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 AL592148.2-201ENST00000612210 372 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.07□□□□□ -2.24
CLTCL1P53675 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.07□□□□□ -2.24
CLTCL1P53675 AL589743.1-201ENST00000551932 2712 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLTCL1P53675 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 U8.14-201ENST00000390843 143 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 RNU2-71P-201ENST00000411395 189 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.07□□□□□ -2.24
CLTCL1P53675 JTBP1-201ENST00000441314 247 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 SUMO2P2-201ENST00000456482 255 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.07□□□□□ -2.24
CLTCL1P53675 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLTCL1P53675 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.07□□□□□ -2.24
CLTCL1P53675 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.07□□□□□ -2.24
CLTCL1P53675 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.07□□□□□ -2.24
CLTCL1P53675 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
CLTCL1P53675 MTND4P31-201ENST00000425607 1343 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.06□□□□□ -2.24
CLTCL1P53675 Y_RNA.85-201ENST00000363014 111 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 RNU6-1077P-201ENST00000410506 102 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 USP12PX-201ENST00000432383 1057 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 AC023141.11-201ENST00000508864 202 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 AC021646.1-201ENST00000605469 484 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 MIR8087-201ENST00000612745 78 ntBASIC1.06□□□□□ -2.24
CLTCL1P53675 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLTCL1P53675 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.05□□□□□ -2.24
CLTCL1P53675 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
CLTCL1P53675 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms