Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-356P-201ENST00000384140 107 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RNU6-432P-201ENST00000384196 109 ntBASIC3.8□□□□□ -1.8
COPB1P53618 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COPB1P53618 ATP5A1P2-201ENST00000412323 255 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RPL31P12-201ENST00000422587 358 ntBASIC3.8□□□□□ -1.8
COPB1P53618 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 RPL23AP82-202ENST00000427528 469 ntBASIC3.8□□□□□ -1.8
COPB1P53618 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 MTND3P23-201ENST00000431980 347 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RPL36AP53-201ENST00000432891 316 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
COPB1P53618 SNRPGP6-201ENST00000451124 220 ntBASIC3.8□□□□□ -1.8
COPB1P53618 PMCHL2-203ENST00000457791 237 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RNU7-63P-201ENST00000459054 62 ntBASIC3.8□□□□□ -1.8
COPB1P53618 CENPBD1P1-201ENST00000464061 469 ntBASIC3.8□□□□□ -1.8
COPB1P53618 GMFBP1-201ENST00000467831 427 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC126389.1-201ENST00000477436 290 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 AC114786.4-201ENST00000508771 728 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC025465.4-201ENST00000513422 638 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.8□□□□□ -1.8
COPB1P53618 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.8□□□□□ -1.8
COPB1P53618 HMGB1P41-201ENST00000520234 440 ntBASIC3.8□□□□□ -1.8
COPB1P53618 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
COPB1P53618 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.8□□□□□ -1.8
COPB1P53618 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 LLPHP1-201ENST00000603571 367 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AC019176.2-201ENST00000611579 315 ntBASIC3.8□□□□□ -1.8
COPB1P53618 Y_RNA.804-201ENST00000615262 101 ntBASIC3.8□□□□□ -1.8
COPB1P53618 AL603758.1-201ENST00000618654 241 ntBASIC3.8□□□□□ -1.8
COPB1P53618 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 AL645937.1-201ENST00000641739 1652 ntBASIC3.8□□□□□ -1.8
COPB1P53618 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPB1P53618 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.8□□□□□ -1.8
COPB1P53618 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPB1P53618 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPB1P53618 RNU1-75P-201ENST00000347264 129 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RNU6-223P-201ENST00000362830 107 ntBASIC3.79□□□□□ -1.8
COPB1P53618 Y_RNA.86-201ENST00000363020 111 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RNU6-1249P-201ENST00000363237 111 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RNU5E-6P-201ENST00000365574 115 ntBASIC3.79□□□□□ -1.8
COPB1P53618 MIR454-201ENST00000390180 115 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AL109755.1-201ENST00000401791 649 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RNU2-36P-201ENST00000410361 191 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RNU6-712P-201ENST00000410558 100 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPB1P53618 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.79□□□□□ -1.8
COPB1P53618 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 AC073415.1-201ENST00000449240 153 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 PPIAP3-201ENST00000450588 505 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 MTND1P11-201ENST00000456661 876 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AL163973.1-201ENST00000484753 577 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RPS15AP36-201ENST00000492022 382 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 AC105417.1-201ENST00000514691 285 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 AC103783.1-201ENST00000520506 373 ntBASIC3.79□□□□□ -1.8
COPB1P53618 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.79□□□□□ -1.8
COPB1P53618 RAB11AP2-201ENST00000545905 639 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AL138976.2-201ENST00000563989 694 ntBASIC3.79□□□□□ -1.8
COPB1P53618 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
COPB1P53618 AL117336.2-201ENST00000602435 335 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC103710.3-201ENST00000608157 948 ntBASIC3.79□□□□□ -1.8
COPB1P53618 TUG1_1.1-201ENST00000610654 145 ntBASIC3.79□□□□□ -1.8
COPB1P53618 MIR6130-201ENST00000619419 109 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC093648.1-201ENST00000623546 606 ntBASIC3.79□□□□□ -1.8
COPB1P53618 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPB1P53618 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPB1P53618 MTCO1P9-201ENST00000505577 1534 ntBASIC3.79□□□□□ -1.8
COPB1P53618 AC032011.1-201ENST00000611703 1549 ntBASIC3.79□□□□□ -1.8
COPB1P53618 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.79□□□□□ -1.8
COPB1P53618 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPB1P53618 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COPB1P53618 AC090337.1-201ENST00000579651 2074 ntBASIC3.79□□□□□ -1.8
COPB1P53618 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.78□□□□□ -1.8
COPB1P53618 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.78□□□□□ -1.8
COPB1P53618 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPB1P53618 RNU6-996P-201ENST00000365438 107 ntBASIC3.78□□□□□ -1.8
COPB1P53618 RNU6-1009P-201ENST00000390996 107 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.78□□□□□ -1.8
COPB1P53618 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.78□□□□□ -1.8
COPB1P53618 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.78□□□□□ -1.8
COPB1P53618 NOTCH2P1-201ENST00000443481 624 ntBASIC3.78□□□□□ -1.8
COPB1P53618 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms