Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC022080.3-201ENST00000544433 482 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCN3P51790 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCN3P51790 EIF4BP1-201ENST00000554881 351 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 ZNF519P2-201ENST00000557032 169 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 RPL23AP84-201ENST00000571193 464 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC008277.2-201ENST00000605196 797 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC008250.2-201ENST00000615261 205 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 PISRT1-201ENST00000626175 531 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC002546.1-201ENST00000588041 2504 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCN3P51790 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCN3P51790 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCN3P51790 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCN3P51790 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 SNORA44-201ENST00000384584 132 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 MIR181A1-201ENST00000385026 110 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC110754.1-201ENST00000399740 601 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 RPL5P18-201ENST00000406671 891 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CLCN3P51790 UBE2FP1-201ENST00000416536 447 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 RPL35AP12-201ENST00000425362 338 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 TXNP1-201ENST00000441872 371 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.44□□□□□ -1.86
CLCN3P51790 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CLCN3P51790 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 RPL23AP14-201ENST00000468281 468 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 NDUFB4P2-201ENST00000509515 391 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 SNORA18.6-201ENST00000516792 115 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLCN3P51790 PSMA2P1-201ENST00000526365 646 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC011602.1-201ENST00000546484 331 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC124947.2-202ENST00000552735 133 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.44□□□□□ -1.86
CLCN3P51790 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.44□□□□□ -1.86
CLCN3P51790 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 DUXAP4-201ENST00000603046 613 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AF250324.2-201ENST00000608299 610 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AL391813.2-201ENST00000609113 322 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC012531.5-201ENST00000611375 151 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 AC022306.2-201ENST00000617563 647 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 AC006386.2-201ENST00000624491 75 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 AC012005.1-201ENST00000624575 75 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLCN3P51790 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCN3P51790 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCN3P51790 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.44□□□□□ -1.86
CLCN3P51790 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.44□□□□□ -1.86
CLCN3P51790 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.44□□□□□ -1.86
CLCN3P51790 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CLCN3P51790 AC118273.1-201ENST00000525324 3006 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLCN3P51790 RNU5A-1-201ENST00000362698 116 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 Y_RNA.554-201ENST00000384672 102 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 RPL23AP32-201ENST00000395315 459 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 TXNP7-201ENST00000406296 293 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 C1DP2-201ENST00000418167 426 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC019097.1-201ENST00000424783 735 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 USP9YP18-201ENST00000425912 695 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 ISCA1P1-201ENST00000426679 387 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC137499.1-201ENST00000427602 88 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 MRPS10P2-201ENST00000431226 381 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 USP12PX-201ENST00000432383 1057 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCN3P51790 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCN3P51790 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCN3P51790 HMGN2P7-201ENST00000456186 273 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC008481.1-201ENST00000463278 396 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 RPS27AP1-201ENST00000475545 471 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AL049873.1-201ENST00000480540 376 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 KCTD9P5-201ENST00000504141 1170 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 RNU1-61P-201ENST00000516107 151 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 RNU1-103P-201ENST00000516502 125 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 SCARNA13-201ENST00000516672 275 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 RNU2-46P-201ENST00000517038 113 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AP003181.2-201ENST00000528941 181 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AP002404.1-201ENST00000532005 451 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC087883.1-201ENST00000551882 391 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 OR4H12P-201ENST00000556269 907 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCN3P51790 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCN3P51790 AC055876.1-202ENST00000567053 138 ntBASIC3.43□□□□□ -1.86
CLCN3P51790 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.43□□□□□ -1.86
CLCN3P51790 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms