Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TXNP7-201ENST00000406296 293 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AC023141.4-201ENST00000412031 328 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AF274854.1-201ENST00000413236 615 ntBASIC2.2□□□□□ -2.06
RFC3P40938 MTND1P23-201ENST00000416931 372 ntBASIC2.2□□□□□ -2.06
RFC3P40938 NPM1P11-201ENST00000417106 855 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AL449283.1-202ENST00000418249 604 ntBASIC2.2□□□□□ -2.06
RFC3P40938 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.2□□□□□ -2.06
RFC3P40938 MTCO2P17-201ENST00000424336 677 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
RFC3P40938 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.2□□□□□ -2.06
RFC3P40938 RPL35AP22-201ENST00000436855 335 ntBASIC2.2□□□□□ -2.06
RFC3P40938 OR10R1P-201ENST00000441524 1141 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AC233279.1-201ENST00000455300 423 ntBASIC2.2□□□□□ -2.06
RFC3P40938 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.2□□□□□ -2.06
RFC3P40938 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.2□□□□□ -2.06
RFC3P40938 SNORA31.18-201ENST00000517043 134 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.2□□□□□ -2.06
RFC3P40938 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
RFC3P40938 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.2□□□□□ -2.06
RFC3P40938 AC135507.1-201ENST00000607214 561 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AC239868.4-201ENST00000608318 671 ntBASIC2.2□□□□□ -2.06
RFC3P40938 TUG1_2.1-201ENST00000614234 87 ntBASIC2.2□□□□□ -2.06
RFC3P40938 AC010133.1-201ENST00000615809 842 ntBASIC2.2□□□□□ -2.06
RFC3P40938 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.2□□□□□ -2.06
RFC3P40938 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RFC3P40938 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFC3P40938 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RFC3P40938 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.19□□□□□ -2.06
RFC3P40938 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFC3P40938 RNU6-223P-201ENST00000362830 107 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RNU6-884P-201ENST00000363889 107 ntBASIC2.19□□□□□ -2.06
RFC3P40938 Y_RNA.472-201ENST00000384322 102 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RNU6-1072P-201ENST00000384703 107 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RNU6-443P-201ENST00000384780 107 ntBASIC2.19□□□□□ -2.06
RFC3P40938 MIR1284-201ENST00000408337 120 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.19□□□□□ -2.06
RFC3P40938 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC3P40938 AC098826.1-201ENST00000433943 471 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RPS15AP5-201ENST00000436276 388 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFC3P40938 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFC3P40938 ZNF886P-201ENST00000450781 723 ntBASIC2.19□□□□□ -2.06
RFC3P40938 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC3P40938 RPL12P25-201ENST00000455592 494 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RPL26P9-201ENST00000457466 433 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.19□□□□□ -2.06
RFC3P40938 AC133134.1-201ENST00000466800 359 ntBASIC2.19□□□□□ -2.06
RFC3P40938 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.19□□□□□ -2.06
RFC3P40938 AC026436.1-201ENST00000510537 270 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AC024589.1-201ENST00000512207 263 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.19□□□□□ -2.06
RFC3P40938 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC3P40938 RNU6-276P-201ENST00000516114 96 ntBASIC2.19□□□□□ -2.06
RFC3P40938 SCARNA17.1-201ENST00000516211 143 ntBASIC2.19□□□□□ -2.06
RFC3P40938 SCARNA17.2-201ENST00000516334 143 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
RFC3P40938 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RFC3P40938 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFC3P40938 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC3P40938 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.19□□□□□ -2.06
RFC3P40938 AC061975.8-201ENST00000587058 721 ntBASIC2.19□□□□□ -2.06
RFC3P40938 MTND4LP5-201ENST00000605152 292 ntBASIC2.19□□□□□ -2.06
RFC3P40938 SCARNA17.4-201ENST00000614296 143 ntBASIC2.19□□□□□ -2.06
RFC3P40938 SDR42E1P2-201ENST00000614861 481 ntBASIC2.19□□□□□ -2.06
RFC3P40938 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFC3P40938 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
RFC3P40938 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC3P40938 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFC3P40938 RNA5SP456-201ENST00000364002 114 ntBASIC2.18□□□□□ -2.06
RFC3P40938 Y_RNA.311-201ENST00000365068 96 ntBASIC2.18□□□□□ -2.06
RFC3P40938 RNU1-100P-201ENST00000365255 165 ntBASIC2.18□□□□□ -2.06
RFC3P40938 RNU6-744P-201ENST00000365557 107 ntBASIC2.18□□□□□ -2.06
RFC3P40938 RNU6-1316P-201ENST00000384242 108 ntBASIC2.18□□□□□ -2.06
RFC3P40938 RNU6-1000P-201ENST00000391066 106 ntBASIC2.18□□□□□ -2.06
RFC3P40938 CCNG1P1-201ENST00000406783 885 ntBASIC2.18□□□□□ -2.06
RFC3P40938 USP9YP13-201ENST00000417797 480 ntBASIC2.18□□□□□ -2.06
RFC3P40938 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.18□□□□□ -2.06
RFC3P40938 Z80107.1-201ENST00000436830 412 ntBASIC2.18□□□□□ -2.06
RFC3P40938 RPS12P2-201ENST00000439728 269 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC3P40938 AL513124.1-201ENST00000450410 614 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.18□□□□□ -2.06
RFC3P40938 HMGB1P36-201ENST00000487709 576 ntBASIC2.18□□□□□ -2.06
RFC3P40938 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFC3P40938 NDUFB4P2-201ENST00000509515 391 ntBASIC2.18□□□□□ -2.06
RFC3P40938 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC3P40938 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
RFC3P40938 SNORA19.3-201ENST00000516165 130 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC3P40938 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC3P40938 AP002770.2-201ENST00000543613 532 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC3P40938 ISCA1P3-201ENST00000577104 373 ntBASIC2.18□□□□□ -2.06
RFC3P40938 MIR5092-201ENST00000583139 88 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AL357094.1-201ENST00000603845 844 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC3P40938 PART1_2.1-201ENST00000612397 250 ntBASIC2.18□□□□□ -2.06
RFC3P40938 AC099063.3-201ENST00000642066 185 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms