Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR2AP24928 AC233702.9-201ENST00000581528 203 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC124312.5-201ENST00000604451 268 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC023813.4-201ENST00000607580 580 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 OR6R2P-201ENST00000609216 300 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC133104.2-201ENST00000615272 193 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC010205.1-201ENST00000616668 449 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC008121.3-201ENST00000618726 433 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR2AP24928 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
POLR2AP24928 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR2AP24928 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
POLR2AP24928 RNU1-70P-201ENST00000362618 164 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 MIR454-201ENST00000390180 115 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 RNU6-278P-201ENST00000390945 109 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 SNORA48.8-201ENST00000391324 134 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AL606923.1-201ENST00000406616 190 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 EIF4EP1-201ENST00000422311 642 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR2AP24928 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR2AP24928 AC119618.1-201ENST00000434191 222 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 GTF2IP13-201ENST00000438487 386 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AL137792.2-201ENST00000443484 235 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR2AP24928 AC073415.1-201ENST00000449240 153 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AL356010.1-201ENST00000456364 102 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AL163973.1-201ENST00000484753 577 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR2AP24928 RNU4-29P-201ENST00000515943 174 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.98□□□□□ -1.77
POLR2AP24928 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR2AP24928 AC115085.1-201ENST00000588924 229 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 VN1R107P-201ENST00000601784 209 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC245517.5-201ENST00000611529 162 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AC104237.2-201ENST00000612456 443 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR2AP24928 AL354950.2-201ENST00000617939 290 ntBASIC3.98□□□□□ -1.77
POLR2AP24928 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 MTND5P10-201ENST00000603719 1809 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 AC118273.1-201ENST00000525324 3006 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.97□□□□□ -1.77
POLR2AP24928 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 Y_RNA.187-201ENST00000363918 113 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNU6-7-201ENST00000364784 107 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNU6-996P-201ENST00000365438 107 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNU6-8-201ENST00000365467 107 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNY4P36-201ENST00000391116 96 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNU6-1148P-201ENST00000410992 104 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 HSPE1P1-201ENST00000421494 318 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR2AP24928 RPL35AP22-201ENST00000436855 335 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AL035666.1-201ENST00000446195 348 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.97□□□□□ -1.77
POLR2AP24928 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR2AP24928 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR2AP24928 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR2AP24928 FAM206BP-201ENST00000510179 541 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RNU6-559P-201ENST00000516151 98 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 RN7SKP209-201ENST00000516888 304 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR2AP24928 AL355836.1-201ENST00000555951 870 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR2AP24928 uc_338.22-201ENST00000622722 187 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 AC090574.1-201ENST00000623186 233 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR2AP24928 SCN1A-220ENST00000641603 12506 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
POLR2AP24928 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
POLR2AP24928 AC092125.1-201ENST00000562568 1995 ntBASIC3.97□□□□□ -1.77
POLR2AP24928 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR2AP24928 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.96□□□□□ -1.77
POLR2AP24928 MFSD8-233ENST00000641482 4860 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC062016.1-201ENST00000355719 319 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 MT-TG-201ENST00000387429 68 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 SNORD37.1-201ENST00000390968 65 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 RNA5SP146-201ENST00000410743 123 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.96□□□□□ -1.77
POLR2AP24928 AL358176.2-201ENST00000425769 204 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 USP9YP16-201ENST00000430287 407 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 FTLP19-201ENST00000433300 394 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.96□□□□□ -1.77
POLR2AP24928 BRK1P2-201ENST00000442875 223 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC073587.1-201ENST00000447093 876 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 RPL7P52-201ENST00000449200 742 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AL162388.1-201ENST00000450912 352 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.96□□□□□ -1.77
POLR2AP24928 USP9YP23-201ENST00000455085 407 ntBASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms