Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHRNB1P11230 Y_RNA.22-201ENST00000362492 102 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 Y_RNA.70-201ENST00000362886 110 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CHRNB1P11230 SNORA69-201ENST00000383895 132 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 HLFP1-201ENST00000402375 499 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AL356776.1-201ENST00000406574 447 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AC012498.1-201ENST00000424037 437 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 SEPT14P3-201ENST00000439401 183 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AL732372.2-207ENST00000445840 183 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AC140076.1-201ENST00000449897 361 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 SEPT14P2-201ENST00000453405 183 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 SNRPGP3-201ENST00000469405 227 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AP000852.1-201ENST00000472460 573 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNB1P11230 SEPT14P4-201ENST00000513445 186 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 FO082796.1-201ENST00000523795 183 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AC011979.2-201ENST00000527568 352 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC055876.1-202ENST00000567053 138 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 AC007687.1-201ENST00000602704 304 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 BNIP3P9-201ENST00000603714 553 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 Z84480.1-201ENST00000605131 311 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 AC138649.5-201ENST00000637456 137 ntBASIC3.6□□□□□ -1.83
CHRNB1P11230 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNB1P11230 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNB1P11230 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CHRNB1P11230 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNB1P11230 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNB1P11230 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNB1P11230 AL079305.1-201ENST00000623159 3008 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU6-797P-201ENST00000363101 109 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 SNORD56.2-201ENST00000363242 71 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU5E-8P-201ENST00000363502 116 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU6-263P-201ENST00000363811 107 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 Y_RNA.381-201ENST00000365666 102 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU6-39P-201ENST00000384344 107 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU6-606P-201ENST00000384721 111 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU6-754P-201ENST00000391166 107 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNA5SP118-201ENST00000410385 109 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 BX323014.1-201ENST00000412876 237 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RPL21P111-201ENST00000418453 477 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 MTND4P25-201ENST00000441039 533 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC016696.1-201ENST00000446949 318 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AL356010.1-201ENST00000456364 102 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AL049714.1-201ENST00000466686 347 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNB1P11230 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNB1P11230 SNORD27.1-201ENST00000516319 72 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RN7SKP289-201ENST00000517244 295 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 IGKV2-26-201ENST00000518305 343 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 OR4R1P-201ENST00000529879 463 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 OR5BN1P-201ENST00000532955 829 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AL133271.1-201ENST00000538229 291 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNB1P11230 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNB1P11230 AC009994.1-201ENST00000606889 253 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AL158211.4-201ENST00000606988 584 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 RMST_3.1-201ENST00000611651 109 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC093838.1-201ENST00000613014 469 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 AC104260.1-201ENST00000616660 539 ntBASIC3.59□□□□□ -1.83
CHRNB1P11230 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNB1P11230 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CHRNB1P11230 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHRNB1P11230 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CHRNB1P11230 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
CHRNB1P11230 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNB1P11230 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.58□□□□□ -1.84
CHRNB1P11230 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms