Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RPS26P2-201ENST00000440331 348 ntBASIC5.03□□□□□ -1.6
RARAP10276 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.03□□□□□ -1.6
RARAP10276 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.03□□□□□ -1.6
RARAP10276 snoU13.20-201ENST00000459180 104 ntBASIC5.03□□□□□ -1.6
RARAP10276 RPS15AP34-201ENST00000487776 387 ntBASIC5.03□□□□□ -1.6
RARAP10276 AC026784.1-201ENST00000507986 352 ntBASIC5.03□□□□□ -1.6
RARAP10276 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.03□□□□□ -1.6
RARAP10276 HMGN2P6-201ENST00000551091 273 ntBASIC5.03□□□□□ -1.6
RARAP10276 FKBP1BP1-201ENST00000553366 325 ntBASIC5.03□□□□□ -1.6
RARAP10276 AC093249.4-201ENST00000564755 259 ntBASIC5.03□□□□□ -1.6
RARAP10276 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.03□□□□□ -1.6
RARAP10276 MIR5696-201ENST00000578474 85 ntBASIC5.03□□□□□ -1.6
RARAP10276 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.03□□□□□ -1.6
RARAP10276 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
RARAP10276 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.03□□□□□ -1.6
RARAP10276 SDR42E1P1-201ENST00000611327 477 ntBASIC5.03□□□□□ -1.6
RARAP10276 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.03□□□□□ -1.6
RARAP10276 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RARAP10276 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RARAP10276 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RARAP10276 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 SMG1P6-201ENST00000532337 2930 ntBASIC5.02□□□□□ -1.61
RARAP10276 AL391987.6-201ENST00000305671 199 ntBASIC5.02□□□□□ -1.61
RARAP10276 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 RNU6-774P-201ENST00000363238 107 ntBASIC5.02□□□□□ -1.61
RARAP10276 RNA5SP123-201ENST00000363244 119 ntBASIC5.02□□□□□ -1.61
RARAP10276 RNU6-595P-201ENST00000363944 107 ntBASIC5.02□□□□□ -1.61
RARAP10276 Y_RNA.297-201ENST00000364950 91 ntBASIC5.02□□□□□ -1.61
RARAP10276 RNU6-746P-201ENST00000384112 109 ntBASIC5.02□□□□□ -1.61
RARAP10276 MIR215-201ENST00000384858 110 ntBASIC5.02□□□□□ -1.61
RARAP10276 RNU6-882P-201ENST00000391025 103 ntBASIC5.02□□□□□ -1.61
RARAP10276 SNORD58.1-201ENST00000391313 66 ntBASIC5.02□□□□□ -1.61
RARAP10276 MTCO2P33-201ENST00000402100 465 ntBASIC5.02□□□□□ -1.61
RARAP10276 RNA5SP296-201ENST00000410523 111 ntBASIC5.02□□□□□ -1.61
RARAP10276 MTATP6P29-201ENST00000415057 132 ntBASIC5.02□□□□□ -1.61
RARAP10276 RPL23AP27-201ENST00000415161 451 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC096920.1-201ENST00000423991 241 ntBASIC5.02□□□□□ -1.61
RARAP10276 SDAD1P3-201ENST00000427380 333 ntBASIC5.02□□□□□ -1.61
RARAP10276 AL451062.2-201ENST00000427515 271 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC007686.1-201ENST00000488511 463 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC022493.1-201ENST00000492984 337 ntBASIC5.02□□□□□ -1.61
RARAP10276 RN7SL808P-201ENST00000496066 299 ntBASIC5.02□□□□□ -1.61
RARAP10276 HMGN1P11-201ENST00000508668 303 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC007016.1-201ENST00000512110 244 ntBASIC5.02□□□□□ -1.61
RARAP10276 SNORA31.6-201ENST00000516241 130 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.02□□□□□ -1.61
RARAP10276 BNIP3P5-201ENST00000562290 498 ntBASIC5.02□□□□□ -1.61
RARAP10276 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 AL121932.1-201ENST00000605542 214 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC008962.1-201ENST00000605729 304 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC034102.8-201ENST00000615146 484 ntBASIC5.02□□□□□ -1.61
RARAP10276 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 AC091905.4-201ENST00000623432 202 ntBASIC5.02□□□□□ -1.61
RARAP10276 Z99571.1-201ENST00000636677 394 ntBASIC5.02□□□□□ -1.61
RARAP10276 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.02□□□□□ -1.61
RARAP10276 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.02□□□□□ -1.61
RARAP10276 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
RARAP10276 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RARAP10276 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RARAP10276 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RARAP10276 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.01□□□□□ -1.61
RARAP10276 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RARAP10276 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RARAP10276 AL445487.1-201ENST00000415694 1580 ntBASIC5.01□□□□□ -1.61
RARAP10276 TLK1P1-201ENST00000456760 2440 ntBASIC5.01□□□□□ -1.61
RARAP10276 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.01□□□□□ -1.61
RARAP10276 RNA5SP52-201ENST00000362448 134 ntBASIC5.01□□□□□ -1.61
RARAP10276 RN7SKP104-201ENST00000362605 328 ntBASIC5.01□□□□□ -1.61
RARAP10276 RNU6-886P-201ENST00000384319 105 ntBASIC5.01□□□□□ -1.61
RARAP10276 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.01□□□□□ -1.61
RARAP10276 AP000275.1-201ENST00000411943 390 ntBASIC5.01□□□□□ -1.61
RARAP10276 AL645608.4-201ENST00000423619 154 ntBASIC5.01□□□□□ -1.61
RARAP10276 RPS27P18-201ENST00000431701 247 ntBASIC5.01□□□□□ -1.61
RARAP10276 AC112498.1-201ENST00000444401 332 ntBASIC5.01□□□□□ -1.61
RARAP10276 RNU6-1037P-201ENST00000459571 107 ntBASIC5.01□□□□□ -1.61
RARAP10276 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.01□□□□□ -1.61
RARAP10276 RPL7AP6-201ENST00000477943 801 ntBASIC5.01□□□□□ -1.61
RARAP10276 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.01□□□□□ -1.61
RARAP10276 APOOP4-201ENST00000513530 597 ntBASIC5.01□□□□□ -1.61
RARAP10276 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.01□□□□□ -1.61
RARAP10276 GMPSP1-201ENST00000514075 579 ntBASIC5.01□□□□□ -1.61
RARAP10276 RNA5SP228-201ENST00000516232 133 ntBASIC5.01□□□□□ -1.61
RARAP10276 IGKV2-23-201ENST00000518729 323 ntBASIC5.01□□□□□ -1.61
RARAP10276 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.01□□□□□ -1.61
RARAP10276 AC067852.4-201ENST00000590314 478 ntBASIC5.01□□□□□ -1.61
RARAP10276 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RARAP10276 CR381572.2-201ENST00000624852 397 ntBASIC5.01□□□□□ -1.61
RARAP10276 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms