Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNRPA1P09661 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.3□□□□□ -1.72
SNRPA1P09661 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.29□□□□□ -1.72
SNRPA1P09661 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.29□□□□□ -1.72
SNRPA1P09661 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.29□□□□□ -1.72
SNRPA1P09661 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNRPA1P09661 RNA5SP502-201ENST00000362694 119 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 Y_RNA.142-201ENST00000363491 102 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RNU6-263P-201ENST00000363811 107 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RNU6-1078P-201ENST00000364522 103 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 RNU6-767P-201ENST00000384132 107 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 Y_RNA.509-201ENST00000384506 99 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RNU1-89P-201ENST00000384592 164 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNRPA1P09661 RNU4-47P-201ENST00000410876 114 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC096664.2-201ENST00000411843 406 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC063979.1-201ENST00000415539 377 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RPL36AP53-201ENST00000432891 316 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.29□□□□□ -1.72
SNRPA1P09661 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 SNRPGP5-201ENST00000456003 220 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 AC068305.1-201ENST00000497406 726 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 EIF4EP3-201ENST00000498782 656 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.29□□□□□ -1.72
SNRPA1P09661 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.29□□□□□ -1.72
SNRPA1P09661 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.29□□□□□ -1.72
SNRPA1P09661 AP000857.1-201ENST00000532151 543 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.29□□□□□ -1.72
SNRPA1P09661 ARL2BPP2-201ENST00000550907 489 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 SETP7-201ENST00000552169 453 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.29□□□□□ -1.72
SNRPA1P09661 AL133153.1-201ENST00000557756 303 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.29□□□□□ -1.72
SNRPA1P09661 AP001029.3-201ENST00000588063 596 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AL162713.1-201ENST00000604480 262 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC073657.2-201ENST00000605661 303 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 AC087045.1-201ENST00000605856 382 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 C2orf27A-204ENST00000623058 969 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNRPA1P09661 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.29□□□□□ -1.72
SNRPA1P09661 PABPC1P7-201ENST00000413177 1513 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 RIOK3P1-201ENST00000418778 1528 ntBASIC4.29□□□□□ -1.72
SNRPA1P09661 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNRPA1P09661 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNRPA1P09661 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.28□□□□□ -1.72
SNRPA1P09661 RNU4-73P-201ENST00000363164 141 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 Y_RNA.157-201ENST00000363638 102 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 U3.11-201ENST00000364476 212 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 Y_RNA.255-201ENST00000364581 97 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 RNU6-996P-201ENST00000365438 107 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 Y_RNA.535-201ENST00000384612 99 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 RNU6-278P-201ENST00000390945 109 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 SNORA48.5-201ENST00000391143 135 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC092447.6-201ENST00000414578 210 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 MTCYBP8-201ENST00000422855 651 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.28□□□□□ -1.72
SNRPA1P09661 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.28□□□□□ -1.72
SNRPA1P09661 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.28□□□□□ -1.72
SNRPA1P09661 RNU7-59P-201ENST00000459101 61 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.28□□□□□ -1.72
SNRPA1P09661 SUB1P1-201ENST00000524415 382 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC011979.2-201ENST00000527568 352 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC128657.1-201ENST00000549459 145 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.28□□□□□ -1.72
SNRPA1P09661 RPS3AP23-202ENST00000574601 686 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.28□□□□□ -1.72
SNRPA1P09661 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SNRPA1P09661 AC010133.1-201ENST00000615809 842 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 AC005858.4-201ENST00000623191 700 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNRPA1P09661 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.28□□□□□ -1.72
SNRPA1P09661 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNRPA1P09661 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.28□□□□□ -1.72
SNRPA1P09661 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNRPA1P09661 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SNRPA1P09661 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNRPA1P09661 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.28□□□□□ -1.72
SNRPA1P09661 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SNRPA1P09661 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SNRPA1P09661 RNU6-845P-201ENST00000362578 103 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 RNU6-606P-201ENST00000384721 111 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AL136116.1-201ENST00000403591 381 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 RNU6-373P-201ENST00000411247 98 ntBASIC4.27□□□□□ -1.73
SNRPA1P09661 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms