Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
TPM2P07951 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
TPM2P07951 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TPM2P07951 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TPM2P07951 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.53□□□□□ -2
TPM2P07951 RNU6-754P-201ENST00000391166 107 ntBASIC2.53□□□□□ -2
TPM2P07951 AL591416.1-201ENST00000404015 867 ntBASIC2.53□□□□□ -2
TPM2P07951 NUP35P1-201ENST00000422734 947 ntBASIC2.53□□□□□ -2
TPM2P07951 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM2P07951 RPS15AP28-201ENST00000435088 386 ntBASIC2.53□□□□□ -2
TPM2P07951 GTF2IP7-202ENST00000436677 309 ntBASIC2.53□□□□□ -2
TPM2P07951 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.53□□□□□ -2
TPM2P07951 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.53□□□□□ -2
TPM2P07951 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM2P07951 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.53□□□□□ -2
TPM2P07951 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TPM2P07951 MTCYBP16-201ENST00000509187 1129 ntBASIC2.53□□□□□ -2
TPM2P07951 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
TPM2P07951 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
TPM2P07951 OR11H5P-201ENST00000554039 926 ntBASIC2.53□□□□□ -2
TPM2P07951 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
TPM2P07951 BBIP1P1-201ENST00000602999 279 ntBASIC2.53□□□□□ -2
TPM2P07951 SDR42E1P2-201ENST00000614861 481 ntBASIC2.53□□□□□ -2
TPM2P07951 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
TPM2P07951 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
TPM2P07951 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM2P07951 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TPM2P07951 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TPM2P07951 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM2P07951 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM2P07951 RNA5SP387-201ENST00000364226 106 ntBASIC2.52□□□□□ -2.01
TPM2P07951 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TPM2P07951 RN7SKP158-201ENST00000410453 326 ntBASIC2.52□□□□□ -2.01
TPM2P07951 RNA5SP270-201ENST00000411361 118 ntBASIC2.52□□□□□ -2.01
TPM2P07951 RNU6-516P-201ENST00000411381 104 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 BX276092.3-201ENST00000424182 230 ntBASIC2.52□□□□□ -2.01
TPM2P07951 RPL30P4-201ENST00000429309 333 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC016691.1-201ENST00000441321 413 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AL021397.1-201ENST00000451806 248 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 BX322784.1-201ENST00000455793 1077 ntBASIC2.52□□□□□ -2.01
TPM2P07951 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC025033.1-201ENST00000463883 194 ntBASIC2.52□□□□□ -2.01
TPM2P07951 RPL7P20-201ENST00000520308 745 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM2P07951 SNRPGP1-201ENST00000553864 222 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC005776.1-201ENST00000603164 290 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC004805.2-201ENST00000605382 482 ntBASIC2.52□□□□□ -2.01
TPM2P07951 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
TPM2P07951 PISRT1-201ENST00000626175 531 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AC006927.2-201ENST00000639256 389 ntBASIC2.52□□□□□ -2.01
TPM2P07951 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM2P07951 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM2P07951 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
TPM2P07951 HSPA8P4-201ENST00000511877 1920 ntBASIC2.51□□□□□ -2.01
TPM2P07951 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM2P07951 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM2P07951 AL161781.1-201ENST00000354277 403 ntBASIC2.51□□□□□ -2.01
TPM2P07951 RNU6-343P-201ENST00000364709 104 ntBASIC2.51□□□□□ -2.01
TPM2P07951 OR5H15-201ENST00000383696 930 ntBASIC2.51□□□□□ -2.01
TPM2P07951 MIR17-201ENST00000385012 84 ntBASIC2.51□□□□□ -2.01
TPM2P07951 RNU6-952P-201ENST00000391164 108 ntBASIC2.51□□□□□ -2.01
TPM2P07951 U6atac.2-201ENST00000408644 118 ntBASIC2.51□□□□□ -2.01
TPM2P07951 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.51□□□□□ -2.01
TPM2P07951 NANOGP5-201ENST00000424456 877 ntBASIC2.51□□□□□ -2.01
TPM2P07951 RPS3AP44-201ENST00000425466 790 ntBASIC2.51□□□□□ -2.01
TPM2P07951 SKA2P1-201ENST00000425592 390 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC093106.2-201ENST00000428212 385 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC006946.1-201ENST00000429106 328 ntBASIC2.51□□□□□ -2.01
TPM2P07951 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM2P07951 MTCYBP42-201ENST00000444653 1130 ntBASIC2.51□□□□□ -2.01
TPM2P07951 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM2P07951 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM2P07951 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM2P07951 RPL31P50-201ENST00000471002 296 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC092902.1-201ENST00000486999 259 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM2P07951 RNU6-1225P-201ENST00000516336 65 ntBASIC2.51□□□□□ -2.01
TPM2P07951 RN7SKP31-201ENST00000516354 278 ntBASIC2.51□□□□□ -2.01
TPM2P07951 SNORA26.10-201ENST00000516427 141 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM2P07951 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM2P07951 AP003497.1-201ENST00000528472 562 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC105245.1-201ENST00000581934 244 ntBASIC2.51□□□□□ -2.01
TPM2P07951 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
TPM2P07951 MIR4765-201ENST00000585007 77 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM2P07951 AC005000.2-201ENST00000605468 310 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AC069545.1-201ENST00000605671 358 ntBASIC2.51□□□□□ -2.01
TPM2P07951 AP001486.3-201ENST00000615334 372 ntBASIC2.51□□□□□ -2.01
TPM2P07951 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM2P07951 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TPM2P07951 ANKRD36P1-201ENST00000344424 659 ntBASIC2.5□□□□□ -2.01
TPM2P07951 RNU5B-4P-201ENST00000363508 111 ntBASIC2.5□□□□□ -2.01
TPM2P07951 RNU1-73P-201ENST00000383971 164 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms