Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MIR3198-2-201ENST00000577868 80 ntBASIC1.34□□□□□ -2.19
APOC1P02654 PRR13P7-201ENST00000605538 430 ntBASIC1.34□□□□□ -2.19
APOC1P02654 MIR8081-201ENST00000611533 95 ntBASIC1.34□□□□□ -2.19
APOC1P02654 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.34□□□□□ -2.2
APOC1P02654 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
APOC1P02654 U3.13-201ENST00000364804 214 ntBASIC1.33□□□□□ -2.2
APOC1P02654 RNU6-441P-201ENST00000384545 106 ntBASIC1.33□□□□□ -2.2
APOC1P02654 MIR504-201ENST00000385065 83 ntBASIC1.33□□□□□ -2.2
APOC1P02654 AL513185.2-201ENST00000425543 193 ntBASIC1.33□□□□□ -2.2
APOC1P02654 Z85994.2-201ENST00000434327 452 ntBASIC1.33□□□□□ -2.2
APOC1P02654 UBE2V1P5-201ENST00000440070 405 ntBASIC1.33□□□□□ -2.2
APOC1P02654 OR10R1P-201ENST00000441524 1141 ntBASIC1.33□□□□□ -2.2
APOC1P02654 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.33□□□□□ -2.2
APOC1P02654 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.33□□□□□ -2.2
APOC1P02654 BNIP3P25-201ENST00000596023 559 ntBASIC1.33□□□□□ -2.2
APOC1P02654 AC011374.2-201ENST00000607135 526 ntBASIC1.33□□□□□ -2.2
APOC1P02654 PISRT1-201ENST00000626175 531 ntBASIC1.33□□□□□ -2.2
APOC1P02654 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.33□□□□□ -2.2
APOC1P02654 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
APOC1P02654 RNU6-152P-201ENST00000384037 107 ntBASIC1.32□□□□□ -2.2
APOC1P02654 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
APOC1P02654 SNORA67.6-201ENST00000391093 99 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC023141.4-201ENST00000412031 328 ntBASIC1.32□□□□□ -2.2
APOC1P02654 Z85995.1-201ENST00000415547 335 ntBASIC1.32□□□□□ -2.2
APOC1P02654 HMGB1P49-201ENST00000418882 569 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC244453.4-201ENST00000419150 388 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC246680.2-201ENST00000422106 389 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AL121882.1-201ENST00000422893 417 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC244035.1-201ENST00000430042 390 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.32□□□□□ -2.2
APOC1P02654 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.32□□□□□ -2.2
APOC1P02654 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.32□□□□□ -2.2
APOC1P02654 AC068135.1-201ENST00000446164 246 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AC116337.1-201ENST00000509680 687 ntBASIC1.32□□□□□ -2.2
APOC1P02654 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.32□□□□□ -2.2
APOC1P02654 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
APOC1P02654 AP005597.4-201ENST00000526762 229 ntBASIC1.32□□□□□ -2.2
APOC1P02654 MIR4713-201ENST00000582691 75 ntBASIC1.32□□□□□ -2.2
APOC1P02654 AL035411.2-201ENST00000604022 421 ntBASIC1.32□□□□□ -2.2
APOC1P02654 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
APOC1P02654 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.32□□□□□ -2.2
APOC1P02654 AP005901.5-201ENST00000545779 1796 ntBASIC1.31□□□□□ -2.2
APOC1P02654 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
APOC1P02654 CDC27P3-201ENST00000635418 1910 ntBASIC1.31□□□□□ -2.2
APOC1P02654 DEFB108F-201ENST00000344638 222 ntBASIC1.31□□□□□ -2.2
APOC1P02654 RNU6-543P-201ENST00000362576 108 ntBASIC1.31□□□□□ -2.2
APOC1P02654 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
APOC1P02654 TAF9BP2-201ENST00000400856 499 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.31□□□□□ -2.2
APOC1P02654 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.31□□□□□ -2.2
APOC1P02654 AL358453.1-201ENST00000422522 250 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AL512844.2-201ENST00000433990 593 ntBASIC1.31□□□□□ -2.2
APOC1P02654 MTND6P13-201ENST00000443510 523 ntBASIC1.31□□□□□ -2.2
APOC1P02654 USP9YP10-201ENST00000454868 628 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC114786.4-201ENST00000508771 728 ntBASIC1.31□□□□□ -2.2
APOC1P02654 FAM206BP-201ENST00000510179 541 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC109464.2-201ENST00000510242 943 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC114797.1-201ENST00000514003 728 ntBASIC1.31□□□□□ -2.2
APOC1P02654 RNU6-1095P-201ENST00000516148 108 ntBASIC1.31□□□□□ -2.2
APOC1P02654 RNA5SP137-201ENST00000516833 135 ntBASIC1.31□□□□□ -2.2
APOC1P02654 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.31□□□□□ -2.2
APOC1P02654 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
APOC1P02654 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
APOC1P02654 DEFB108D-201ENST00000527787 222 ntBASIC1.31□□□□□ -2.2
APOC1P02654 OR4P1P-201ENST00000530808 1136 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.31□□□□□ -2.2
APOC1P02654 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.31□□□□□ -2.2
APOC1P02654 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.31□□□□□ -2.2
APOC1P02654 AC097504.2-201ENST00000608088 454 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC069294.1-201ENST00000608397 350 ntBASIC1.31□□□□□ -2.2
APOC1P02654 AC108479.2-201ENST00000617314 601 ntBASIC1.31□□□□□ -2.2
APOC1P02654 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
APOC1P02654 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
APOC1P02654 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOC1P02654 BTF3L4P2-201ENST00000392798 346 ntBASIC1.3□□□□□ -2.2
APOC1P02654 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 MTND4LP10-201ENST00000435146 291 ntBASIC1.3□□□□□ -2.2
APOC1P02654 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.3□□□□□ -2.2
APOC1P02654 snoU13.26-201ENST00000459452 105 ntBASIC1.3□□□□□ -2.2
APOC1P02654 RPS27P23-201ENST00000487608 251 ntBASIC1.3□□□□□ -2.2
APOC1P02654 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.3□□□□□ -2.2
APOC1P02654 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 RNU6-1282P-201ENST00000516735 96 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 AP000916.1-201ENST00000533869 835 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.3□□□□□ -2.2
APOC1P02654 AC027807.1-201ENST00000559921 996 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.3□□□□□ -2.2
APOC1P02654 AC008121.1-201ENST00000603244 268 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AC016925.2-201ENST00000605108 242 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AC103810.8-201ENST00000607347 118 ntBASIC1.3□□□□□ -2.2
APOC1P02654 AL109659.3-201ENST00000624985 950 ntBASIC1.3□□□□□ -2.2
APOC1P02654 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
APOC1P02654 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
APOC1P02654 RNA5SP212-201ENST00000391223 107 ntBASIC1.29□□□□□ -2.2
APOC1P02654 RNU6-272P-201ENST00000411028 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms