Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL022578.1-201ENST00000439330 1433 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL2A1P02458 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL2A1P02458 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL2A1P02458 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL2A1P02458 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-666P-201ENST00000363499 107 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-1066P-201ENST00000363573 105 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-621P-201ENST00000364752 109 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 Y_RNA.402-201ENST00000383972 102 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-483P-201ENST00000384088 108 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 Y_RNA.535-201ENST00000384612 99 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 FGF7P8-201ENST00000402994 292 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 MIR1289-2-201ENST00000408360 111 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.09□□□□□ -1.92
COL2A1P02458 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.09□□□□□ -1.92
COL2A1P02458 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.09□□□□□ -1.92
COL2A1P02458 NSRP1P1-201ENST00000444067 1693 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC007677.1-201ENST00000445757 515 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AL590399.6-201ENST00000446396 307 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.09□□□□□ -1.92
COL2A1P02458 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RN7SL330P-201ENST00000469709 307 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC018710.1-201ENST00000506509 158 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.09□□□□□ -1.92
COL2A1P02458 AC048346.1-201ENST00000510247 144 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC105914.1-201ENST00000511798 226 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-358P-201ENST00000516564 75 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 Y_RNA.701-201ENST00000516812 110 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RNU6-430P-201ENST00000517078 107 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 TRAV37-201ENST00000553906 342 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 MIR5697-201ENST00000578045 78 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.09□□□□□ -1.92
COL2A1P02458 AC005332.6-201ENST00000613178 446 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL2A1P02458 AC009268.2-201ENST00000621925 457 ntBASIC3.09□□□□□ -1.92
COL2A1P02458 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.09□□□□□ -1.92
COL2A1P02458 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
COL2A1P02458 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL2A1P02458 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.08□□□□□ -1.92
COL2A1P02458 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.08□□□□□ -1.92
COL2A1P02458 AC008725.1-201ENST00000605123 2263 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
COL2A1P02458 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL2A1P02458 DCAF13P1-201ENST00000495256 1330 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC107982.1-201ENST00000507171 1300 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RNU6-582P-201ENST00000362989 107 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RNU4-73P-201ENST00000363164 141 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RNY4P14-201ENST00000363656 96 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RNU6-809P-201ENST00000384461 107 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL2A1P02458 RPS4XP7-201ENST00000406274 780 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RN7SKP223-201ENST00000410582 62 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.08□□□□□ -1.92
COL2A1P02458 RPL7P10-201ENST00000417407 739 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AL159169.1-201ENST00000421119 127 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.08□□□□□ -1.92
COL2A1P02458 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
COL2A1P02458 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.08□□□□□ -1.92
COL2A1P02458 AC092427.1-201ENST00000439177 601 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.08□□□□□ -1.92
COL2A1P02458 USP9YP12-201ENST00000450481 570 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.08□□□□□ -1.92
COL2A1P02458 AC098583.1-201ENST00000480875 255 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 SRIP1-201ENST00000489235 288 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC012170.1-201ENST00000495139 359 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.08□□□□□ -1.92
COL2A1P02458 HMGB1P28-201ENST00000507778 552 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.08□□□□□ -1.92
COL2A1P02458 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.08□□□□□ -1.92
COL2A1P02458 OR5AL2P-201ENST00000532185 920 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 BPTFP1-201ENST00000579209 492 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 UBE2V2P2-201ENST00000587677 504 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
COL2A1P02458 BNIP3P23-201ENST00000599655 511 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC008536.2-201ENST00000607284 349 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC092650.2-201ENST00000619984 902 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AL136221.1-201ENST00000621449 509 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 AC231657.1-201ENST00000624313 397 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.08□□□□□ -1.92
COL2A1P02458 MTND1P37-201ENST00000636562 264 ntBASIC3.08□□□□□ -1.92
COL2A1P02458 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.08□□□□□ -1.92
COL2A1P02458 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 MTCO1P6-201ENST00000481192 1384 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC016717.2-201ENST00000609089 5141 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 Y_RNA.89-201ENST00000363031 102 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RNU6-492P-201ENST00000363035 104 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RNU6-984P-201ENST00000363236 109 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 RNU4-31P-201ENST00000384211 141 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RNU6-185P-201ENST00000384421 107 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 Y_RNA.509-201ENST00000384506 99 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RNU6-178P-201ENST00000384631 104 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms