Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 FCF1P3-201ENST00000496394 590 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AC107401.1-201ENST00000503426 685 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 VN1R104P-201ENST00000505115 1009 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN1O95832 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN1O95832 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN1O95832 Vault.3-201ENST00000516676 95 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 RNU6-579P-201ENST00000516879 102 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 RNU6-798P-201ENST00000516912 103 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 RNA5SP337-201ENST00000517007 109 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 SNORA31.20-201ENST00000517111 133 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 DEFB108A-201ENST00000530110 222 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AL133271.1-201ENST00000538229 291 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN1O95832 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN1O95832 AC103710.2-201ENST00000609912 942 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AC073534.2-201ENST00000620377 381 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 AC138649.3-201ENST00000622154 254 ntBASIC2.95□□□□□ -1.94
CLDN1O95832 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLDN1O95832 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN1O95832 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CLDN1O95832 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
CLDN1O95832 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN1O95832 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN1O95832 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN1O95832 MTCO1P9-201ENST00000505577 1534 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 TAB3P1-202ENST00000452645 1634 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC068647.1-201ENST00000489539 2265 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN1O95832 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN1O95832 RNU6-511P-201ENST00000363496 107 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RNU5E-8P-201ENST00000363502 116 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN1O95832 AL109755.1-201ENST00000401791 649 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RPS3AP24-201ENST00000407896 734 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 U3.39-201ENST00000408569 239 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RNU4-65P-201ENST00000410473 140 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RNU6-516P-201ENST00000411381 104 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 MTCO3P12-201ENST00000416718 547 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 SSXP9-201ENST00000417503 292 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 ISCA1P6-201ENST00000427740 390 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RPL31P35-201ENST00000431058 377 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC090774.1-201ENST00000435925 246 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 ARPC3P1-201ENST00000437218 533 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC016696.1-201ENST00000446949 318 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 MRPS31P2-201ENST00000451581 518 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 C1DP4-201ENST00000455429 424 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 HMGN2P16-201ENST00000456802 261 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AP002884.2-201ENST00000471647 395 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC023598.1-201ENST00000472521 361 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RPS3AP17-201ENST00000472594 777 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 RN7SL432P-201ENST00000484057 298 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC135721.1-201ENST00000497954 479 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 NDUFB9P3-201ENST00000521269 501 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 IGHV3-76-201ENST00000522465 295 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC022616.3-201ENST00000523940 148 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 DEFB108D-201ENST00000527787 222 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AP002404.1-201ENST00000532005 451 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN1O95832 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 AC012182.1-201ENST00000570133 895 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 MIR3167-201ENST00000579623 85 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN1O95832 MIR4293-201ENST00000584305 78 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC107304.1-201ENST00000604229 296 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AL590282.1-201ENST00000610379 1136 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC090970.3-201ENST00000612566 866 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN1O95832 U4.5-201ENST00000617137 123 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 PLCE1P1-201ENST00000622094 305 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 AC068880.5-201ENST00000624331 290 ntBASIC2.94□□□□□ -1.94
CLDN1O95832 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN1O95832 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN1O95832 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CLDN1O95832 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN1O95832 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN1O95832 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CLDN1O95832 OR4G2P-201ENST00000328113 903 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN1O95832 RNU6-223P-201ENST00000362830 107 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 RNA5SP197-201ENST00000363357 119 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN1O95832 AL445529.1-201ENST00000398713 389 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 GSTA9P-201ENST00000406231 611 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 RNU6-55P-201ENST00000411092 107 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 RNU6-954P-201ENST00000411355 107 ntBASIC2.93□□□□□ -1.94
CLDN1O95832 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms