Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RTN3O95197 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RTN3O95197 U8.3-201ENST00000363321 132 ntBASIC3.47□□□□□ -1.85
RTN3O95197 RNY4P34-201ENST00000364779 95 ntBASIC3.47□□□□□ -1.85
RTN3O95197 RNU5E-6P-201ENST00000365574 115 ntBASIC3.47□□□□□ -1.85
RTN3O95197 RNU6-217P-201ENST00000384164 104 ntBASIC3.47□□□□□ -1.85
RTN3O95197 MIR634-201ENST00000385208 97 ntBASIC3.47□□□□□ -1.85
RTN3O95197 NDUFB4P4-201ENST00000404822 243 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AL354719.1-201ENST00000406535 843 ntBASIC3.47□□□□□ -1.85
RTN3O95197 RPL5P18-201ENST00000406671 891 ntBASIC3.47□□□□□ -1.85
RTN3O95197 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AL356968.1-201ENST00000416622 474 ntBASIC3.47□□□□□ -1.85
RTN3O95197 ELOCP4-201ENST00000420090 333 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.47□□□□□ -1.85
RTN3O95197 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.47□□□□□ -1.85
RTN3O95197 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.47□□□□□ -1.85
RTN3O95197 ATP5C1P1-201ENST00000441945 895 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AL022238.1-201ENST00000442557 355 ntBASIC3.47□□□□□ -1.85
RTN3O95197 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.47□□□□□ -1.85
RTN3O95197 AC093534.1-201ENST00000504977 132 ntBASIC3.47□□□□□ -1.85
RTN3O95197 SNORA64.4-201ENST00000516632 81 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AP006587.4-201ENST00000526053 529 ntBASIC3.47□□□□□ -1.85
RTN3O95197 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.47□□□□□ -1.85
RTN3O95197 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.47□□□□□ -1.85
RTN3O95197 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
RTN3O95197 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.47□□□□□ -1.85
RTN3O95197 YPEL5P2-201ENST00000605553 359 ntBASIC3.47□□□□□ -1.85
RTN3O95197 AC087752.4-201ENST00000605911 462 ntBASIC3.47□□□□□ -1.85
RTN3O95197 PISRT1-201ENST00000626175 531 ntBASIC3.47□□□□□ -1.85
RTN3O95197 MAPK10-322ENST00000641485 4530 ntBASIC3.47□□□□□ -1.85
RTN3O95197 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.47□□□□□ -1.85
RTN3O95197 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RTN3O95197 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
RTN3O95197 FARSBP1-201ENST00000435808 1778 ntBASIC3.46□□□□□ -1.86
RTN3O95197 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 Y_RNA.111-201ENST00000363248 100 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RNU6-270P-201ENST00000364131 105 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RNU4-47P-201ENST00000410876 114 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 MRPL50P2-201ENST00000416821 482 ntBASIC3.46□□□□□ -1.86
RTN3O95197 BTF3L4P3-201ENST00000418879 476 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.46□□□□□ -1.86
RTN3O95197 HMGB3P11-201ENST00000440127 604 ntBASIC3.46□□□□□ -1.86
RTN3O95197 NEFMP1-201ENST00000443423 1006 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AL031183.1-201ENST00000457667 207 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RNU6-956P-201ENST00000458868 103 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RPS26P21-201ENST00000475397 348 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RAP1BP2-201ENST00000478270 544 ntBASIC3.46□□□□□ -1.86
RTN3O95197 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 RNU7-51P-201ENST00000516560 62 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RNU6-1092P-201ENST00000516955 87 ntBASIC3.46□□□□□ -1.86
RTN3O95197 RNA5SP290-201ENST00000517133 127 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AP000873.5-201ENST00000533906 236 ntBASIC3.46□□□□□ -1.86
RTN3O95197 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.46□□□□□ -1.86
RTN3O95197 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AC137800.2-201ENST00000574375 120 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.46□□□□□ -1.86
RTN3O95197 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.46□□□□□ -1.86
RTN3O95197 NRBF2P1-201ENST00000587407 859 ntBASIC3.46□□□□□ -1.86
RTN3O95197 GLUD1P4-201ENST00000590914 418 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AC078899.3-201ENST00000599065 212 ntBASIC3.46□□□□□ -1.86
RTN3O95197 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.46□□□□□ -1.86
RTN3O95197 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
RTN3O95197 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RTN3O95197 TEX21P-201ENST00000447107 1476 ntBASIC3.46□□□□□ -1.86
RTN3O95197 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
RTN3O95197 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
RTN3O95197 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RTN3O95197 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
RTN3O95197 SNORD56.2-201ENST00000363242 71 ntBASIC3.45□□□□□ -1.86
RTN3O95197 Y_RNA.245-201ENST00000364493 95 ntBASIC3.45□□□□□ -1.86
RTN3O95197 RNU6-140P-201ENST00000384566 108 ntBASIC3.45□□□□□ -1.86
RTN3O95197 RNU6-297P-201ENST00000384636 107 ntBASIC3.45□□□□□ -1.86
RTN3O95197 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN3O95197 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.45□□□□□ -1.86
RTN3O95197 RNU6-248P-201ENST00000410720 107 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.45□□□□□ -1.86
RTN3O95197 AC007283.2-201ENST00000424739 197 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC093151.1-201ENST00000427711 313 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.45□□□□□ -1.86
RTN3O95197 RPL21P40-201ENST00000428586 483 ntBASIC3.45□□□□□ -1.86
RTN3O95197 SETP8-201ENST00000435341 628 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.45□□□□□ -1.86
RTN3O95197 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.45□□□□□ -1.86
RTN3O95197 Z75741.1-201ENST00000446793 314 ntBASIC3.45□□□□□ -1.86
RTN3O95197 MTND1P27-201ENST00000451117 902 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN3O95197 snoU13.28-201ENST00000459235 104 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.45□□□□□ -1.86
RTN3O95197 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN3O95197 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms