Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBE4BO95155 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
UBE4BO95155 RNU6-217P-201ENST00000384164 104 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 RNU6-83P-201ENST00000384568 112 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 RNU2-33P-201ENST00000410344 192 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 HMGB1P49-201ENST00000418882 569 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 USP12PX-201ENST00000432383 1057 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBE4BO95155 EEF1B2P7-201ENST00000451177 676 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 AC087588.1-201ENST00000462203 316 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 UBL5P3-201ENST00000475112 231 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.82□□□□□ -1.96
UBE4BO95155 AL160314.1-201ENST00000490836 438 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.82□□□□□ -1.96
UBE4BO95155 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.82□□□□□ -1.96
UBE4BO95155 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.82□□□□□ -1.96
UBE4BO95155 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.82□□□□□ -1.96
UBE4BO95155 NRBF2P5-201ENST00000603087 788 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 AC087241.4-201ENST00000612441 480 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
UBE4BO95155 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.82□□□□□ -1.96
UBE4BO95155 AL078595.3-201ENST00000623815 1166 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
UBE4BO95155 ZNF519P1-201ENST00000449011 1626 ntBASIC2.82□□□□□ -1.96
UBE4BO95155 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
UBE4BO95155 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
UBE4BO95155 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.81□□□□□ -1.96
UBE4BO95155 ZNF876P-202ENST00000398732 1485 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBE4BO95155 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UBE4BO95155 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBE4BO95155 RPL21P132-201ENST00000331267 462 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.81□□□□□ -1.96
UBE4BO95155 RNU6-278P-201ENST00000390945 109 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBE4BO95155 RAP1BP1-201ENST00000412709 553 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.81□□□□□ -1.96
UBE4BO95155 RPL21P24-201ENST00000413752 448 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 NPM1P11-201ENST00000417106 855 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 USP9YP20-201ENST00000419224 558 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.81□□□□□ -1.96
UBE4BO95155 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.81□□□□□ -1.96
UBE4BO95155 ELOCP30-201ENST00000447108 299 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 RPS15AP27-201ENST00000449183 343 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 FDX1P2-201ENST00000450769 375 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.81□□□□□ -1.96
UBE4BO95155 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.81□□□□□ -1.96
UBE4BO95155 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.81□□□□□ -1.96
UBE4BO95155 RNU5A-4P-201ENST00000516588 111 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC068587.4-201ENST00000533893 186 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.81□□□□□ -1.96
UBE4BO95155 AC091544.4-201ENST00000555268 342 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 UBE2L4-201ENST00000587688 464 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AL355877.2-201ENST00000603670 358 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AL450336.1-201ENST00000605180 586 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC007038.2-201ENST00000608095 740 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AL158801.5-201ENST00000623123 465 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC092608.2-201ENST00000624427 218 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 PABPC1P9-201ENST00000426076 1612 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 AC092125.1-201ENST00000562568 1995 ntBASIC2.81□□□□□ -1.96
UBE4BO95155 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
UBE4BO95155 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
UBE4BO95155 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UBE4BO95155 RNA5SP88-201ENST00000365560 109 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 RPS4XP8-201ENST00000402039 771 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 RNU2-52P-201ENST00000410680 190 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.8□□□□□ -1.96
UBE4BO95155 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.8□□□□□ -1.96
UBE4BO95155 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.8□□□□□ -1.96
UBE4BO95155 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.8□□□□□ -1.96
UBE4BO95155 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.8□□□□□ -1.96
UBE4BO95155 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.8□□□□□ -1.96
UBE4BO95155 AC009296.1-201ENST00000443146 155 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.8□□□□□ -1.96
UBE4BO95155 ANKRD26P4-201ENST00000455755 950 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 SRIP1-201ENST00000489235 288 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.8□□□□□ -1.96
UBE4BO95155 MTCO2P15-201ENST00000532655 656 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 AC093012.1-202ENST00000549403 582 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
UBE4BO95155 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.8□□□□□ -1.96
UBE4BO95155 AC068790.3-201ENST00000602988 553 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 AC103710.1-201ENST00000610003 901 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 FTX_3.1-201ENST00000610451 147 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 MIR7843-201ENST00000622274 79 ntBASIC2.8□□□□□ -1.96
UBE4BO95155 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.8□□□□□ -1.96
UBE4BO95155 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.8□□□□□ -1.96
UBE4BO95155 MTND5P33-201ENST00000571250 1450 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.79□□□□□ -1.96
UBE4BO95155 RPL21P75-201ENST00000396599 483 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 RPL21P28-201ENST00000401418 483 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 AL592114.1-201ENST00000403842 483 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.79□□□□□ -1.96
UBE4BO95155 BTF3L4P3-201ENST00000418879 476 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.79□□□□□ -1.96
UBE4BO95155 AL358075.3-201ENST00000426289 226 ntBASIC2.79□□□□□ -1.96
UBE4BO95155 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.79□□□□□ -1.96
UBE4BO95155 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms