Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNND1O60716 AP005205.1-201ENST00000563503 508 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.12□□□□□ -1.75
CTNND1O60716 BRDTP1-201ENST00000605735 677 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AP001330.5-201ENST00000607176 411 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.12□□□□□ -1.75
CTNND1O60716 MIR7112-201ENST00000616126 65 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AC244205.2-202ENST00000635781 342 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 AC008568.2-201ENST00000623862 2313 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTNND1O60716 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNND1O60716 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNND1O60716 MTND5P17-201ENST00000418405 1603 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNND1O60716 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 FRG1CP-201ENST00000358464 769 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 Y_RNA.9-201ENST00000362354 101 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 Y_RNA.367-201ENST00000365544 101 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 SMIM11P1-201ENST00000369586 178 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 RNU2-9P-201ENST00000410194 145 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNND1O60716 UBE2V1P8-201ENST00000437166 265 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNND1O60716 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNND1O60716 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTNND1O60716 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNND1O60716 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.11□□□□□ -1.75
CTNND1O60716 AP001804.3-201ENST00000525146 880 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 AP001646.1-201ENST00000527936 915 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNND1O60716 AC027807.1-201ENST00000559921 996 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 HMGB1P33-201ENST00000563485 527 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 AC007363.1-201ENST00000604736 620 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 AC008536.2-201ENST00000607284 349 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNND1O60716 AL160394.1-201ENST00000624765 724 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNND1O60716 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNND1O60716 ZNF680P1-201ENST00000436625 1469 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 AC066616.2-201ENST00000559334 1481 ntBASIC4.11□□□□□ -1.75
CTNND1O60716 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNND1O60716 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTNND1O60716 MFSD8-233ENST00000641482 4860 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTNND1O60716 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
CTNND1O60716 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CTNND1O60716 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTNND1O60716 Y_RNA.111-201ENST00000363248 100 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 RNU6-946P-201ENST00000383878 107 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 RNU6-606P-201ENST00000384721 111 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 MIR454-201ENST00000390180 115 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 U3.39-201ENST00000408569 239 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC096664.2-201ENST00000411843 406 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 OR51A5P-201ENST00000415429 942 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC114491.1-201ENST00000416095 246 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 SDCBPP3-201ENST00000419629 891 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNND1O60716 NEFMP1-201ENST00000443423 1006 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNND1O60716 DDX3P2-201ENST00000446138 111 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 HMGN2P7-201ENST00000456186 273 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.1□□□□□ -1.75
CTNND1O60716 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNND1O60716 SNORA31.3-201ENST00000516029 96 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 Y_RNA.693-201ENST00000516641 110 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNND1O60716 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNND1O60716 AL512310.1-201ENST00000548639 172 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AL512360.1-201ENST00000555346 234 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC012493.2-201ENST00000595083 291 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNND1O60716 AC174048.1-201ENST00000603389 144 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 DPPA3P3-201ENST00000603842 430 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC104763.2-201ENST00000604179 382 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 AC090132.2-201ENST00000615881 347 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNND1O60716 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CTNND1O60716 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.1□□□□□ -1.75
CTNND1O60716 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNND1O60716 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTNND1O60716 AL356274.2-201ENST00000624379 3752 ntBASIC4.1□□□□□ -1.75
CTNND1O60716 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNND1O60716 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
CTNND1O60716 SNORD6-201ENST00000365444 73 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 RNU4-48P-201ENST00000365559 182 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTNND1O60716 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CTNND1O60716 CIR1P3-201ENST00000405137 479 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 Z98941.1-201ENST00000407764 100 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 BX323014.1-201ENST00000412876 237 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 BNIP3P2-201ENST00000441221 577 ntBASIC4.09□□□□□ -1.75
CTNND1O60716 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms