Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SUMO1P2-201ENST00000452524 304 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.02□□□□□ -1.61
GRIN3BO60391 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.02□□□□□ -1.61
GRIN3BO60391 TRBV1-201ENST00000476502 284 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.02□□□□□ -1.61
GRIN3BO60391 HIGD1AP13-201ENST00000509878 289 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.02□□□□□ -1.61
GRIN3BO60391 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.02□□□□□ -1.61
GRIN3BO60391 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.02□□□□□ -1.61
GRIN3BO60391 AC135001.1-201ENST00000544546 283 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.02□□□□□ -1.61
GRIN3BO60391 AC068446.3-201ENST00000555285 382 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC087499.8-201ENST00000578406 226 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 MIR3672-201ENST00000584290 82 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 HMGB2P1-201ENST00000591146 634 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC174048.1-201ENST00000603389 144 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 MIR6868-201ENST00000611215 58 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC012409.4-201ENST00000612923 249 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC091905.2-201ENST00000623143 306 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 AC243312.2-201ENST00000623340 601 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 MIR4275-201ENST00000636486 87 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.02□□□□□ -1.61
GRIN3BO60391 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.02□□□□□ -1.61
GRIN3BO60391 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
GRIN3BO60391 AL139811.1-201ENST00000424779 2299 ntBASIC5.02□□□□□ -1.61
GRIN3BO60391 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GRIN3BO60391 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GRIN3BO60391 AL049781.1-201ENST00000623195 3585 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC083843.3-201ENST00000623679 2186 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC074029.4-201ENST00000624796 1859 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GRIN3BO60391 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 Y_RNA.135-201ENST00000363439 95 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GRIN3BO60391 Y_RNA.399-201ENST00000383955 105 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 Y_RNA.510-201ENST00000384511 114 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 MIR135A2-201ENST00000384854 100 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 VDAC1P9-201ENST00000412766 841 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AL139247.1-201ENST00000422768 325 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.01□□□□□ -1.61
GRIN3BO60391 TBCAP1-201ENST00000436520 327 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 MTND1P17-201ENST00000448961 204 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.01□□□□□ -1.61
GRIN3BO60391 RBBP4P6-201ENST00000508098 202 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 RN7SKP24-201ENST00000515888 284 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 RNU6-273P-201ENST00000516937 96 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.01□□□□□ -1.61
GRIN3BO60391 COPS8P3-201ENST00000526024 482 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.01□□□□□ -1.61
GRIN3BO60391 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.01□□□□□ -1.61
GRIN3BO60391 AC006064.5-201ENST00000541782 248 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC006116.10-201ENST00000591836 581 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AL109918.3-201ENST00000603072 338 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC009570.1-201ENST00000609599 745 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 AC007998.5-201ENST00000622938 237 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 AL672167.1-203ENST00000641299 2975 ntBASIC5.01□□□□□ -1.61
GRIN3BO60391 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
GRIN3BO60391 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
GRIN3BO60391 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GRIN3BO60391 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
GRIN3BO60391 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.01□□□□□ -1.61
GRIN3BO60391 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GRIN3BO60391 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5□□□□□ -1.61
GRIN3BO60391 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5□□□□□ -1.61
GRIN3BO60391 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
GRIN3BO60391 AL035425.3-201ENST00000564206 4996 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AL139397.2-201ENST00000404529 772 ntBASIC5□□□□□ -1.61
GRIN3BO60391 SNORA74C-2-201ENST00000411179 201 ntBASIC5□□□□□ -1.61
GRIN3BO60391 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5□□□□□ -1.61
GRIN3BO60391 MTND2P29-201ENST00000438595 412 ntBASIC5□□□□□ -1.61
GRIN3BO60391 HMGB3P22-202ENST00000451823 572 ntBASIC5□□□□□ -1.61
GRIN3BO60391 IFNWP4-201ENST00000453148 294 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5□□□□□ -1.61
GRIN3BO60391 RN7SL807P-201ENST00000470923 297 ntBASIC5□□□□□ -1.61
GRIN3BO60391 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5□□□□□ -1.61
GRIN3BO60391 AC012158.1-204ENST00000483430 465 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AC079140.5-201ENST00000507882 310 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5□□□□□ -1.61
GRIN3BO60391 RN7SKP18-201ENST00000516005 275 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AC022634.1-201ENST00000520765 532 ntBASIC5□□□□□ -1.61
GRIN3BO60391 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5□□□□□ -1.61
GRIN3BO60391 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5□□□□□ -1.61
GRIN3BO60391 AL138889.2-201ENST00000603883 242 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AL670379.10-201ENST00000604330 253 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AL670379.9-201ENST00000605428 253 ntBASIC5□□□□□ -1.61
GRIN3BO60391 AL365434.2-201ENST00000607979 234 ntBASIC5□□□□□ -1.61
GRIN3BO60391 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
GRIN3BO60391 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5□□□□□ -1.61
GRIN3BO60391 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5□□□□□ -1.61
GRIN3BO60391 LINC01109-201ENST00000603837 3081 ntBASIC5□□□□□ -1.61
GRIN3BO60391 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
GRIN3BO60391 RNA5SP307-201ENST00000362863 116 ntBASIC4.99□□□□□ -1.61
GRIN3BO60391 RNU6-1252P-201ENST00000363054 104 ntBASIC4.99□□□□□ -1.61
GRIN3BO60391 RNU6-263P-201ENST00000363811 107 ntBASIC4.99□□□□□ -1.61
GRIN3BO60391 Y_RNA.482-201ENST00000384377 111 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms