Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AL356321.1-201ENST00000621360 228 ntBASIC3.09□□□□□ -1.91
PRKNO60260 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKNO60260 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKNO60260 MTND5P1-201ENST00000445440 1375 ntBASIC3.09□□□□□ -1.92
PRKNO60260 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKNO60260 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRKNO60260 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKNO60260 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKNO60260 HSPE1P11-201ENST00000339579 310 ntBASIC3.08□□□□□ -1.92
PRKNO60260 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKNO60260 Y_RNA.22-201ENST00000362492 102 ntBASIC3.08□□□□□ -1.92
PRKNO60260 RNY4P14-201ENST00000363656 96 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKNO60260 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKNO60260 RNU1-39P-201ENST00000383897 165 ntBASIC3.08□□□□□ -1.92
PRKNO60260 RNU6-641P-201ENST00000384006 107 ntBASIC3.08□□□□□ -1.92
PRKNO60260 RNU6-483P-201ENST00000384088 108 ntBASIC3.08□□□□□ -1.92
PRKNO60260 MIR1277-201ENST00000408536 78 ntBASIC3.08□□□□□ -1.92
PRKNO60260 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKNO60260 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKNO60260 MTCO1P20-201ENST00000425366 358 ntBASIC3.08□□□□□ -1.92
PRKNO60260 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKNO60260 AC024082.2-201ENST00000434771 238 ntBASIC3.08□□□□□ -1.92
PRKNO60260 BNIP3P2-201ENST00000441221 577 ntBASIC3.08□□□□□ -1.92
PRKNO60260 RBMX2P4-201ENST00000441256 376 ntBASIC3.08□□□□□ -1.92
PRKNO60260 MTCO3P45-201ENST00000443036 613 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC008264.1-201ENST00000447612 367 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC078785.3-201ENST00000476607 425 ntBASIC3.08□□□□□ -1.92
PRKNO60260 MTAPP1-201ENST00000489154 819 ntBASIC3.08□□□□□ -1.92
PRKNO60260 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.08□□□□□ -1.92
PRKNO60260 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.08□□□□□ -1.92
PRKNO60260 AC004062.1-201ENST00000509926 645 ntBASIC3.08□□□□□ -1.92
PRKNO60260 RNU6-390P-201ENST00000516259 103 ntBASIC3.08□□□□□ -1.92
PRKNO60260 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKNO60260 RPS3AP4-201ENST00000555161 764 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC068135.2-201ENST00000569293 1028 ntBASIC3.08□□□□□ -1.92
PRKNO60260 FAM60BP-201ENST00000578364 658 ntBASIC3.08□□□□□ -1.92
PRKNO60260 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKNO60260 AC006504.3-201ENST00000586818 523 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.08□□□□□ -1.92
PRKNO60260 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKNO60260 AP000907.4-201ENST00000604143 237 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AL161756.2-201ENST00000604597 246 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AL121992.2-201ENST00000606262 256 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC006023.2-201ENST00000609916 167 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AL442067.2-201ENST00000614033 363 ntBASIC3.08□□□□□ -1.92
PRKNO60260 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.08□□□□□ -1.92
PRKNO60260 U6.98-201ENST00000637157 84 ntBASIC3.08□□□□□ -1.92
PRKNO60260 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKNO60260 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKNO60260 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKNO60260 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RNU6-1120P-201ENST00000362988 108 ntBASIC3.07□□□□□ -1.92
PRKNO60260 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 RNU6-74P-201ENST00000384235 107 ntBASIC3.07□□□□□ -1.92
PRKNO60260 MIR558-201ENST00000384920 94 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RPS4XP8-201ENST00000402039 771 ntBASIC3.07□□□□□ -1.92
PRKNO60260 USP9YP27-201ENST00000418455 438 ntBASIC3.07□□□□□ -1.92
PRKNO60260 SDCBPP3-201ENST00000419629 891 ntBASIC3.07□□□□□ -1.92
PRKNO60260 MTND4LP11-201ENST00000422184 280 ntBASIC3.07□□□□□ -1.92
PRKNO60260 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
PRKNO60260 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 MTCO1P39-201ENST00000426148 480 ntBASIC3.07□□□□□ -1.92
PRKNO60260 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC093106.2-201ENST00000428212 385 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.07□□□□□ -1.92
PRKNO60260 RPS20P5-201ENST00000434808 360 ntBASIC3.07□□□□□ -1.92
PRKNO60260 HMGB3P12-201ENST00000438745 556 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 NFU1P2-201ENST00000448700 469 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC022364.2-201ENST00000457963 554 ntBASIC3.07□□□□□ -1.92
PRKNO60260 snoU13.24-201ENST00000458998 104 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC010631.1-201ENST00000474150 156 ntBASIC3.07□□□□□ -1.92
PRKNO60260 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.07□□□□□ -1.92
PRKNO60260 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRKNO60260 PCBP2P3-201ENST00000509726 843 ntBASIC3.07□□□□□ -1.92
PRKNO60260 APOOP4-201ENST00000513530 597 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RNU6-1178P-201ENST00000516674 107 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RNU6-1231P-201ENST00000517185 103 ntBASIC3.07□□□□□ -1.92
PRKNO60260 RNU6-840P-201ENST00000517275 65 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 MTND1P35-201ENST00000526739 508 ntBASIC3.07□□□□□ -1.92
PRKNO60260 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PRKNO60260 AC109635.3-201ENST00000529536 185 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AL157687.1-201ENST00000554853 619 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AL359212.1-201ENST00000556608 614 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.07□□□□□ -1.92
PRKNO60260 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.07□□□□□ -1.92
PRKNO60260 AC007621.1-201ENST00000604544 437 ntBASIC3.07□□□□□ -1.92
PRKNO60260 AP002360.4-201ENST00000606980 481 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms