Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-169P-201ENST00000365336 107 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD6O43541 AL122016.1-201ENST00000403365 367 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AL023807.1-201ENST00000407932 359 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 RNA5SP44-201ENST00000410446 133 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 RNU6-373P-201ENST00000411247 98 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 BTF3L4P3-201ENST00000418879 476 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AL353678.1-201ENST00000422735 741 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD6O43541 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 NDUFA5P4-201ENST00000436704 385 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 RPL23AP74-201ENST00000437246 471 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.56□□□□□ -1.84
SMAD6O43541 MRPL50P4-201ENST00000446432 475 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC005297.2-201ENST00000450430 606 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC233279.1-201ENST00000455300 423 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD6O43541 AC008155.2-201ENST00000464337 397 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 PABPC1P3-201ENST00000469174 459 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.56□□□□□ -1.84
SMAD6O43541 PCBP2P3-201ENST00000509726 843 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 AC107934.1-201ENST00000522215 217 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC022616.3-201ENST00000523940 148 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC022690.1-201ENST00000526681 550 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC109635.4-202ENST00000531666 412 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD6O43541 AC011611.1-201ENST00000552179 197 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD6O43541 AL355375.2-201ENST00000574825 175 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 Z84480.1-201ENST00000605131 311 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC121334.2-201ENST00000605387 271 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD6O43541 MIR7975-201ENST00000619350 68 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD6O43541 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD6O43541 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD6O43541 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
SMAD6O43541 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 MTND5P28-201ENST00000438005 1594 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AF117829.1-206ENST00000621883 3802 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.55□□□□□ -1.84
SMAD6O43541 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 RPL7P26-201ENST00000333817 754 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 Y_RNA.67-201ENST00000362870 100 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RNA5SP50-201ENST00000363731 107 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL162578.1-201ENST00000406202 378 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL354719.1-201ENST00000406535 843 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 MTCO2P12-201ENST00000427426 682 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL365400.1-201ENST00000431854 640 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RPL23AP30-201ENST00000432419 501 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC119618.1-201ENST00000434191 222 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.55□□□□□ -1.84
SMAD6O43541 MTCYBP6-201ENST00000441810 138 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RPL7P12-201ENST00000446719 750 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 PRSS3P4-201ENST00000453323 162 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RPS4XP10-201ENST00000465034 731 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AP000893.1-201ENST00000474462 794 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC026427.2-201ENST00000506228 536 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RNU6-277P-201ENST00000516272 106 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.55□□□□□ -1.84
SMAD6O43541 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 LSM6P2-201ENST00000552208 177 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.55□□□□□ -1.84
SMAD6O43541 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.55□□□□□ -1.84
SMAD6O43541 AL356432.3-201ENST00000568952 465 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 AC243960.4-201ENST00000600532 288 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AC012468.1-201ENST00000604888 430 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 AL356585.4-201ENST00000623078 1229 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 MIR1302-1-201ENST00000637932 143 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMAD6O43541 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD6O43541 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
SMAD6O43541 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
SMAD6O43541 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
SMAD6O43541 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMAD6O43541 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMAD6O43541 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMAD6O43541 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMAD6O43541 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
SMAD6O43541 RNU6-1243P-201ENST00000364028 107 ntBASIC3.54□□□□□ -1.84
SMAD6O43541 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
SMAD6O43541 RNU6-74P-201ENST00000384235 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms