Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA2O43364 RNU5E-7P-201ENST00000365290 117 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 Y_RNA.398-201ENST00000383952 99 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 MIR514A1-201ENST00000385133 98 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 RNU6-918P-201ENST00000391219 106 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 MIR1182-201ENST00000408363 97 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 RNU5A-5P-201ENST00000411054 116 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
HOXA2O43364 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 RPS29P10-201ENST00000439197 166 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 NUTF2P3-201ENST00000448540 384 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 FABP5P15-201ENST00000453566 214 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AC083899.1-201ENST00000454465 3819 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 RPL23AP24-201ENST00000458203 385 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA2O43364 AC091912.1-201ENST00000511351 248 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 OR7H2P-201ENST00000513483 306 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA2O43364 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA2O43364 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA2O43364 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 MIR4480-201ENST00000582492 71 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA2O43364 FAM25E-202ENST00000608562 189 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AL139124.1-201ENST00000609123 421 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AC090617.7-201ENST00000623952 126 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 AC008785.1-201ENST00000624475 456 ntBASIC5.68□□□□□ -1.5
HOXA2O43364 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXA2O43364 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA2O43364 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA2O43364 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA2O43364 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA2O43364 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA2O43364 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA2O43364 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA2O43364 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA2O43364 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 Z73965.1-201ENST00000623412 2297 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA2O43364 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.82-201ENST00000363000 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.92-201ENST00000363043 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 RNA5SP123-201ENST00000363244 119 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 RNU6-173P-201ENST00000364215 104 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 RNU6-879P-201ENST00000364328 108 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.235-201ENST00000364412 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.286-201ENST00000364813 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.306-201ENST00000365015 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.312-201ENST00000365089 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.322-201ENST00000365151 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 RNU6-843P-201ENST00000384454 104 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA2O43364 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA2O43364 SETP5-201ENST00000437270 562 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.650-201ENST00000459002 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 AC010326.1-201ENST00000462726 602 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 RPS29P22-201ENST00000472363 168 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.777-201ENST00000516982 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA2O43364 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA2O43364 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA2O43364 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA2O43364 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.771-201ENST00000598668 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 AC011921.3-201ENST00000605540 361 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 Y_RNA.789-201ENST00000622480 102 ntBASIC5.67□□□□□ -1.5
HOXA2O43364 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
HOXA2O43364 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA2O43364 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXA2O43364 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA2O43364 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA2O43364 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA2O43364 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA2O43364 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA2O43364 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA2O43364 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXA2O43364 RN7SKP104-201ENST00000362605 328 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 MIR153-1-201ENST00000384914 90 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA2O43364 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA2O43364 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 RNU4-30P-201ENST00000410245 143 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 Y_RNA.625-201ENST00000411256 107 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC140479.3-201ENST00000418944 1126 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AP000907.1-201ENST00000428428 510 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 RPS15AP7-201ENST00000439294 405 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms