Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNA5SP454-201ENST00000517231 127 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AC007991.1-201ENST00000522680 631 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 COX6CP5-201ENST00000527162 228 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AL133153.1-201ENST00000557756 303 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 MIR5690-201ENST00000583739 73 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 7SK.7-201ENST00000603504 247 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AP000654.2-201ENST00000605633 586 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 uc_338.11-201ENST00000619132 160 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRGAP3O43295 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRGAP3O43295 BDP1P-201ENST00000582658 1990 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AL122126.1-201ENST00000546905 1318 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 MTND5P19-201ENST00000424872 1794 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SRGAP3O43295 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SRGAP3O43295 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.7□□□□□ -1.66
SRGAP3O43295 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRGAP3O43295 RNVU1-3-201ENST00000364313 161 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SRGAP3O43295 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SRGAP3O43295 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SRGAP3O43295 RNU6-907P-201ENST00000390924 102 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL590704.1-201ENST00000402856 794 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RPL23AP48-201ENST00000406913 488 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 SNORA57.3-201ENST00000411095 141 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.7□□□□□ -1.66
SRGAP3O43295 RPL31P12-201ENST00000422587 358 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 MTCYBP10-201ENST00000424905 650 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.7□□□□□ -1.66
SRGAP3O43295 MTCO3P10-201ENST00000455912 772 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL133162.1-201ENST00000463228 453 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RN7SL542P-201ENST00000467147 294 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RPL7P43-201ENST00000478876 753 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.7□□□□□ -1.66
SRGAP3O43295 AC069499.1-201ENST00000489433 509 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.7□□□□□ -1.66
SRGAP3O43295 RNU6-256P-201ENST00000516747 97 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RNU6-1137P-201ENST00000517073 99 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RNU1-45P-201ENST00000517191 141 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 RN7SKP295-201ENST00000517264 153 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL137161.1-201ENST00000532231 390 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC107016.1-201ENST00000550463 337 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.7□□□□□ -1.66
SRGAP3O43295 IMMP1LP2-201ENST00000552954 492 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
SRGAP3O43295 AC034105.4-201ENST00000568304 277 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 MIR4503-201ENST00000582187 83 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.7□□□□□ -1.66
SRGAP3O43295 AC123786.2-201ENST00000603459 275 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL670379.11-201ENST00000604059 253 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL670379.10-201ENST00000604330 253 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC007938.3-201ENST00000604965 623 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL670379.12-201ENST00000605291 253 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AL670379.9-201ENST00000605428 253 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC005014.2-201ENST00000607795 599 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC087588.2-201ENST00000617667 426 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 AC119674.1-207ENST00000641355 633 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRGAP3O43295 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SRGAP3O43295 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.7□□□□□ -1.66
SRGAP3O43295 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SRGAP3O43295 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRGAP3O43295 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.7□□□□□ -1.66
SRGAP3O43295 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRGAP3O43295 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
SRGAP3O43295 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRGAP3O43295 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRGAP3O43295 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRGAP3O43295 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRGAP3O43295 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRGAP3O43295 Y_RNA.148-201ENST00000363557 117 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 RNU6-331P-201ENST00000384724 107 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 FABP5P14-201ENST00000437273 393 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 NOTCH2P1-201ENST00000443481 624 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AL500522.2-201ENST00000448562 343 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AC022034.3-201ENST00000471393 478 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AL135752.1-201ENST00000479477 471 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 TRBV12-2-201ENST00000489763 344 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 RNU6-64P-201ENST00000517119 105 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC090136.1-201ENST00000520009 240 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AP003122.3-201ENST00000526316 255 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AC110588.1-201ENST00000559699 137 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC138761.3-201ENST00000579993 334 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 MIR3149-201ENST00000584629 83 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.69□□□□□ -1.66
SRGAP3O43295 AC133104.2-201ENST00000615272 193 ntBASIC4.69□□□□□ -1.66
SRGAP3O43295 AL713922.2-201ENST00000619384 716 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms