Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPL23AP30-201ENST00000432419 501 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 NDUFB1P1-201ENST00000435191 180 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC107083.1-201ENST00000439643 279 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 FAM103A2P-201ENST00000444122 354 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 PPP1R2P5-201ENST00000457256 603 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 RPL21P71-201ENST00000465598 459 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 RPS15AP17-201ENST00000470598 390 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 UBA52P3-201ENST00000491303 382 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC005741.1-201ENST00000511094 432 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 RANP9-201ENST00000519957 271 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 SUMO2P20-201ENST00000520803 283 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN1O15353 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 HMGB1P6-201ENST00000569046 646 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN1O15353 MAGOH2P-202ENST00000584384 429 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 VN1R107P-201ENST00000601784 209 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 AC011373.1-201ENST00000607270 237 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 MIR7851-201ENST00000610611 160 ntBASIC4.26□□□□□ -1.73
FOXN1O15353 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN1O15353 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
FOXN1O15353 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN1O15353 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN1O15353 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
FOXN1O15353 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN1O15353 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 AL451142.2-201ENST00000429076 2090 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXN1O15353 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXN1O15353 Y_RNA.231-201ENST00000364358 102 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 SNORA44-201ENST00000384584 132 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 TPMTP2-201ENST00000414372 726 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 AC113618.1-201ENST00000416747 285 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC006020.1-201ENST00000420179 1854 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC007283.2-201ENST00000424739 197 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC009965.2-201ENST00000425328 970 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AL358176.2-201ENST00000425769 204 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 RPS26P47-201ENST00000427219 348 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN1O15353 RPL38P4-201ENST00000502376 214 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 RNU6-202P-201ENST00000515998 96 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 RNU6-714P-201ENST00000516963 103 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 RN7SKP256-201ENST00000517201 314 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.25□□□□□ -1.73
FOXN1O15353 AC022616.3-201ENST00000523940 148 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN1O15353 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN1O15353 AC080078.3-201ENST00000605407 463 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AL080274.1-201ENST00000605565 220 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AL391813.2-201ENST00000609113 322 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 OR10AB1P-201ENST00000609613 938 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC084781.2-201ENST00000615568 161 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 AC091953.2-201ENST00000623979 160 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 MTND4LP32-201ENST00000636111 270 ntBASIC4.25□□□□□ -1.73
FOXN1O15353 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN1O15353 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN1O15353 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXN1O15353 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN1O15353 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN1O15353 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
FOXN1O15353 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 SNORA22B-201ENST00000383876 138 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 Y_RNA.445-201ENST00000384168 102 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms