Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AL445487.1-201ENST00000415694 1580 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNU6-212P-201ENST00000362642 104 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNA5SP132-201ENST00000364725 118 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RN7SKP124-201ENST00000364730 341 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNU6-1062P-201ENST00000383908 107 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNA5SP372-201ENST00000390836 115 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 MIR1290-201ENST00000408735 78 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 MIR548H3-201ENST00000408771 118 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.623-201ENST00000411128 95 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC244098.2-201ENST00000422068 99 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 OR2AM1P-201ENST00000422137 422 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC108075.1-201ENST00000424692 529 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC093655.2-201ENST00000425735 631 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC091390.3-201ENST00000426478 338 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RPEP5-201ENST00000441137 268 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 LINC01399-202ENST00000458450 244 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RPL7P5-201ENST00000471472 736 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 RNA5SP392-201ENST00000516905 112 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 HIGD1AP5-201ENST00000529959 259 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC026470.2-201ENST00000561492 181 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AL355877.2-201ENST00000603670 358 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC013244.1-201ENST00000604279 193 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC087783.2-201ENST00000605070 562 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 AC009318.2-201ENST00000610917 651 ntBASIC4.24□□□□□ -1.73
SHISA3A0PJX4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHISA3A0PJX4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL031595.2-201ENST00000624215 19071 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 U3.2-201ENST00000362981 210 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 RN7SKP160-201ENST00000363804 340 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 RN7SKP227-201ENST00000364445 330 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 RNA5SP235-201ENST00000365411 114 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.477-201ENST00000384352 108 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL391361.1-201ENST00000405580 489 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 RN7SKP167-201ENST00000411047 285 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 Z85995.1-201ENST00000415547 335 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 Z74021.1-201ENST00000423610 407 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL356867.1-201ENST00000429623 299 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL354714.3-201ENST00000447284 493 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AL359273.1-201ENST00000510918 627 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.700-201ENST00000516806 100 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 SNORA31.20-201ENST00000517111 133 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 RNU6-709P-201ENST00000517257 104 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC134698.5-201ENST00000519444 336 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 IGLV2-28-201ENST00000520681 304 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC015912.2-201ENST00000571053 181 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 MIR3176-201ENST00000582210 90 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC006077.1-201ENST00000604746 343 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.23□□□□□ -1.73
SHISA3A0PJX4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHISA3A0PJX4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms