Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CBX3P2-202ENST00000583365 535 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 NRBF2P1-201ENST00000587407 859 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 SEPT7P9-203ENST00000604116 343 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AC010738.1-201ENST00000604970 987 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AP002791.1-201ENST00000623291 381 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AC017104.5-201ENST00000637647 639 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AP005901.5-201ENST00000545779 1796 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-152P-201ENST00000384037 107 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 NPM1P10-201ENST00000398310 865 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-564P-201ENST00000410983 104 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 SDAD1P3-201ENST00000427380 333 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 RAC1P7-201ENST00000445367 377 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 FAM92A1P2-202ENST00000504766 877 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 TPT1P8-201ENST00000510120 555 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC008834.1-201ENST00000511612 175 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC084033.1-201ENST00000550830 633 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC091544.4-201ENST00000555268 342 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 MIR3199-1-201ENST00000582434 88 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC013553.2-201ENST00000604244 589 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC079791.1-201ENST00000605356 973 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AC016542.1-201ENST00000608259 493 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 MIR6798-201ENST00000612887 67 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 PISRT1-201ENST00000626175 531 ntBASIC1.17□□□□□ -2.22
TCRBV3S1A0A5B6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL356292.1-201ENST00000283110 373 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 SNORD82-201ENST00000365530 70 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 MIR325-201ENST00000385260 98 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL035407.1-201ENST00000429211 571 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 HMGB1P9-201ENST00000429856 646 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC022447.1-201ENST00000515358 464 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 RNU5A-7P-201ENST00000515979 116 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 MIR892C-201ENST00000516410 77 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-295P-201ENST00000516901 104 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 HIGD1AP6-201ENST00000521833 279 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 OR8K4P-201ENST00000534608 872 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 GNAI2P1-201ENST00000541815 315 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL133241.1-201ENST00000556832 487 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL391261.3-201ENST00000557194 520 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC105224.1-201ENST00000587055 421 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC011494.1-201ENST00000596454 237 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC008121.1-201ENST00000603244 268 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL035411.2-201ENST00000604022 421 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC018618.2-201ENST00000604770 446 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL391597.1-201ENST00000618707 694 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AC092608.3-201ENST00000625017 386 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TCRBV3S1A0A5B6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
TCRBV3S1A0A5B6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 MIR934-201ENST00000401241 83 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC024082.2-201ENST00000434771 238 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 TRAV11-201ENST00000539512 339 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC087465.1-201ENST00000560574 245 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 ATP5F1P7-201ENST00000567330 760 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 HMGN2P15-201ENST00000585707 270 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AL078605.1-201ENST00000603529 500 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AL137246.1-201ENST00000607072 977 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AC090772.4-201ENST00000623599 362 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 ZNF663P-202ENST00000641770 1131 ntBASIC1.15□□□□□ -2.23
TCRBV3S1A0A5B6 RNA5SP190-201ENST00000365222 118 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms