Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC013442.1-201ENST00000397347 228 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 ELOCP19-201ENST00000411919 318 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AL592045.1-201ENST00000429867 352 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AC011753.3-201ENST00000443436 406 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RPS29P24-201ENST00000486345 171 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 GLUD1P3-202ENST00000508551 200 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RN7SKP67-201ENST00000515905 235 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RNA5SP43-201ENST00000516559 110 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-347P-201ENST00000516658 105 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AL355812.1-201ENST00000603215 216 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AC105254.2-201ENST00000603636 436 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AC108738.1-201ENST00000603703 237 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AP005432.2-201ENST00000608162 586 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AL354798.1-201ENST00000622505 329 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 MFSD8-216ENST00000641147 4009 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 LINC01109-201ENST00000603837 3081 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 Y_RNA.33-201ENST00000362591 102 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 SNORD115-32-201ENST00000364079 82 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 MIR141-201ENST00000384975 95 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 MIR153-2-201ENST00000385225 87 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 SNORA26.2-201ENST00000390922 122 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-381P-201ENST00000391259 108 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 BPY2DP-201ENST00000422208 265 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 COX6B1P7-201ENST00000430845 235 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 RPS15AP5-201ENST00000436276 388 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AC096638.1-201ENST00000444678 216 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AC006463.2-201ENST00000473326 348 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 RPL36AP41-201ENST00000493820 306 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-537P-201ENST00000517277 103 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AC234771.5-201ENST00000600161 514 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AP001284.1-201ENST00000528393 2118 ntBASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC61Q9Y6R9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-384P-201ENST00000364900 104 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 MIR32-201ENST00000384965 70 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 MIR137-201ENST00000385223 102 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 RNA5SP213-201ENST00000391031 106 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC022431.1-201ENST00000450941 438 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 RN7SL738P-201ENST00000470264 297 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC104164.2-201ENST00000496953 495 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AL450472.3-201ENST00000615578 367 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 AC005296.1-201ENST00000616145 209 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 U6.95-201ENST00000636931 70 ntBASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC61Q9Y6R9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC7.09□□□□□ -1.28
CCDC61Q9Y6R9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CCDC61Q9Y6R9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 MIR589-201ENST00000385238 99 ntBASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 SNORA12.1-201ENST00000390873 148 ntBASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 RNU6-1248P-201ENST00000391096 64 ntBASIC7.08□□□□□ -1.28
CCDC61Q9Y6R9 RNU6-460P-201ENST00000391158 108 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms