Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 MIR4424-201ENST00000585257 86 ntBASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 AC008638.3-201ENST00000603341 463 ntBASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 AL138889.2-201ENST00000603883 242 ntBASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 AP001330.4-201ENST00000604350 154 ntBASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 uc_338.34-201ENST00000617467 174 ntBASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB1Q9Y5F3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PCDHB1Q9Y5F3 MTND4P23-201ENST00000447723 1363 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 SNORA63.1-201ENST00000362493 131 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.356-201ENST00000365475 113 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.529-201ENST00000384586 119 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MIR514A2-201ENST00000385131 88 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MIR514A3-201ENST00000385132 88 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MIR607-201ENST00000385241 96 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL162578.1-201ENST00000406202 378 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL451054.2-201ENST00000420896 202 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL356867.1-201ENST00000429623 299 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL121877.1-201ENST00000453704 622 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC117522.3-201ENST00000507974 584 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-927P-201ENST00000516199 100 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC078814.3-201ENST00000553036 491 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL121576.1-201ENST00000556055 276 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC022968.1-201ENST00000567372 442 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC120057.2-201ENST00000571520 271 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC006270.2-201ENST00000578523 652 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-89P-201ENST00000606519 100 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC128687.2-201ENST00000609657 566 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AC093913.1-201ENST00000614178 329 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL773545.4-201ENST00000637262 310 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MTND5P42-201ENST00000637720 498 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 AL513478.4-201ENST00000641636 310 ntBASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB1Q9Y5F3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC016588.2-201ENST00000632484 3021 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-845P-201ENST00000362578 103 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RNU4-73P-201ENST00000363164 141 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RNU4-76P-201ENST00000364509 141 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.263-201ENST00000364659 114 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-190P-201ENST00000384154 102 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 MT-TD-201ENST00000387419 68 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 HSPE1P12-201ENST00000412576 301 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC093578.1-201ENST00000415219 368 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RPL35AP12-201ENST00000425362 338 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 KCTD9P3-201ENST00000434597 1169 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC093019.1-201ENST00000443135 252 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 AC007547.1-201ENST00000462177 490 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 HMGN2P26-201ENST00000463169 339 ntBASIC4.01□□□□□ -1.77
PCDHB1Q9Y5F3 RBBP4P6-201ENST00000508098 202 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms