Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-861P-201ENST00000516745 106 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 RNU4-60P-201ENST00000517239 135 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MIR548AI-201ENST00000579940 88 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MZT1P2-201ENST00000604387 248 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AL162431.4-201ENST00000604674 411 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MIR6820-201ENST00000611508 62 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC090617.7-201ENST00000623952 126 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AL365440.1-201ENST00000436135 2167 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AL731532.2-201ENST00000623542 1953 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 SCARNA15-201ENST00000607520 4325 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 MIR133B-201ENST00000362210 119 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 Y_RNA.44-201ENST00000362676 108 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-1301P-201ENST00000362724 104 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 SNORD63-201ENST00000384262 68 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 MIR34A-201ENST00000385130 110 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 RNA5SP487-201ENST00000410186 122 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 Y_RNA.626-201ENST00000411288 95 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 TMSB10P2-201ENST00000416049 131 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AL389915.2-201ENST00000454576 441 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-377P-201ENST00000515965 102 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-1278P-201ENST00000516130 107 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 SCARNA15.2-201ENST00000516409 127 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 RN7SL356P-201ENST00000582228 248 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AP000769.2-201ENST00000602344 396 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 AC011476.5-201ENST00000615594 130 ntBASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB11Q9Y5F2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB11Q9Y5F2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 DEFB108F-201ENST00000344638 222 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 Y_RNA.122-201ENST00000363331 96 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 Y_RNA.245-201ENST00000364493 95 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 RNU1-43P-201ENST00000365052 165 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA40C-201ENST00000391285 128 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 Z85995.1-201ENST00000415547 335 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AL358453.1-201ENST00000422522 250 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 TOMM22P6-201ENST00000465035 409 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 RPS26P21-201ENST00000475397 348 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 MRPL42P6-201ENST00000486397 371 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AL160314.1-201ENST00000490836 438 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC074198.2-201ENST00000508153 258 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 ATP5F1P5-201ENST00000526403 760 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AP004607.2-201ENST00000533949 322 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 FAM60BP-201ENST00000578364 658 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC006116.3-201ENST00000592968 361 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC100827.5-201ENST00000615883 426 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 AC109583.2-201ENST00000617367 129 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms