Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 MIR3939-201ENST00000582614 106 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 XIAPP1-201ENST00000603162 600 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 IGHV3-29-201ENST00000604817 344 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AL355365.1-201ENST00000616480 294 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AL445567.2-201ENST00000618935 498 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AC098657.3-201ENST00000620434 263 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 MIR6758-201ENST00000620653 63 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AC008785.1-201ENST00000624475 456 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 MTND5P10-201ENST00000603719 1809 ntBASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB4Q9Y5E5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 Y_RNA.28-201ENST00000362554 111 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SNORA23-201ENST00000365128 182 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC110754.1-201ENST00000399740 601 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AL445189.1-201ENST00000405722 338 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SSXP9-201ENST00000417503 292 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC006011.1-201ENST00000442758 349 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AL590399.6-201ENST00000446396 307 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 IFNWP4-201ENST00000453148 294 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 snoU13.3-201ENST00000459441 104 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 TRBV1-201ENST00000476502 284 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 S100A11P1-201ENST00000477525 312 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 VN1R105P-201ENST00000486595 910 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 PTP4A1P4-201ENST00000512479 322 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-390P-201ENST00000516259 103 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-1213P-201ENST00000517075 94 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AP003730.1-201ENST00000524605 285 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC093012.1-202ENST00000549403 582 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AL355836.1-201ENST00000555951 870 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AC106900.2-201ENST00000604994 317 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AL158032.1-201ENST00000605401 106 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 U2.17-201ENST00000611454 95 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 AL450472.3-201ENST00000615578 367 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 MIR8059-201ENST00000620427 81 ntBASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB4Q9Y5E5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 Y_RNA.112-201ENST00000363250 102 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 Y_RNA.399-201ENST00000383955 105 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-310P-201ENST00000384655 107 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 MIR141-201ENST00000384975 95 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-712P-201ENST00000410558 100 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RPLP0P7-201ENST00000416050 667 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RPL7P10-201ENST00000417407 739 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC026979.1-201ENST00000492525 396 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AP001086.1-201ENST00000494882 321 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RPS27AP13-201ENST00000498403 237 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC079140.5-201ENST00000507882 310 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 SNORA31.9-201ENST00000516429 84 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 RNU6-988P-201ENST00000519081 107 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AP006587.4-201ENST00000526053 529 ntBASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB4Q9Y5E5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms