Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 HPVC1-201ENST00000629899 1198 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC087821.2-201ENST00000637086 450 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 SNRPEP3-201ENST00000338402 276 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RNU5E-8P-201ENST00000363502 116 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-750P-201ENST00000390946 107 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AL023284.1-201ENST00000403956 276 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 SNORD23.1-201ENST00000408212 104 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 ZNF863P-201ENST00000426746 417 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC008850.1-201ENST00000427546 362 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RPS15AP5-201ENST00000436276 388 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC079148.1-201ENST00000565944 819 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC026741.1-201ENST00000605892 482 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 FTX_3.1-201ENST00000610451 147 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC253576.2-201ENST00000618815 580 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC084824.4-201ENST00000620106 731 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 MIR4275-201ENST00000636486 87 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 MKKS-204ENST00000639674 192 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC104454.1-201ENST00000421341 1401 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 AC005539.1-201ENST00000443768 1479 ntBASIC1.82□□□□□ -2.12
HDGFL3Q9Y3E1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 FAM133CP-201ENST00000332869 704 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-140P-201ENST00000384566 108 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-253P-201ENST00000384730 105 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AL450338.1-201ENST00000407987 512 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 RNU2-33P-201ENST00000410344 192 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 OSTCP8-201ENST00000445117 448 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 RPL23AP7-203ENST00000449021 469 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 MTATP6P7-201ENST00000453315 681 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 RPL30P9-201ENST00000465586 330 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 TMEM251P1-201ENST00000503717 318 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 COL6A4P2-205ENST00000509855 506 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC098591.2-201ENST00000510152 315 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 snoZ278.1-201ENST00000517059 112 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AP001189.2-201ENST00000527320 189 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC138915.2-201ENST00000569776 97 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC013476.2-201ENST00000614456 459 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AL603758.1-201ENST00000618654 241 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 AC002550.2-201ENST00000621246 394 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 MTND1P37-201ENST00000636562 264 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 MIR1322-201ENST00000638013 71 ntBASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
HDGFL3Q9Y3E1 Y_RNA.25-201ENST00000362528 102 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-216P-201ENST00000363282 104 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 Y_RNA.548-201ENST00000384656 105 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MIR888-201ENST00000401186 77 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MTND3P20-201ENST00000407663 186 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 RNU2-49P-201ENST00000410666 184 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL139156.1-201ENST00000412785 841 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 NPM1P11-201ENST00000417106 855 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC027124.2-201ENST00000428249 105 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 HMGB1P9-201ENST00000429856 646 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MICF-203ENST00000432679 129 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 USP9YP8-201ENST00000441913 500 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL500527.1-201ENST00000448532 255 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 RPS20P22-201ENST00000473700 357 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC105252.1-201ENST00000503089 286 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC023141.11-201ENST00000508864 202 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC093677.1-201ENST00000514414 678 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AP005902.1-201ENST00000521358 186 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms