Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC024614.3-201ENST00000637860 256 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 MTND5P1-201ENST00000445440 1375 ntBASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX2IPQ9Y2D8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-1249P-201ENST00000363237 111 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 RNU4-48P-201ENST00000365559 182 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 MIR483-201ENST00000385070 76 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL109755.1-201ENST00000401791 649 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 MTCO3P12-201ENST00000416718 547 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL513185.2-201ENST00000425543 193 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 OR2AS1P-201ENST00000427827 319 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 USP9YP8-201ENST00000441913 500 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC105417.1-201ENST00000514691 285 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-1095P-201ENST00000516148 108 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC007991.1-201ENST00000522680 631 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 CENPUP1-201ENST00000526649 1202 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 OR5B10P-201ENST00000532869 642 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 OR4K8P-201ENST00000578842 1048 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 FGF7P1-201ENST00000582820 288 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL161756.2-201ENST00000604597 246 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC012468.1-201ENST00000604888 430 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 MIR7851-201ENST00000610611 160 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC130324.3-201ENST00000614165 542 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL354950.2-201ENST00000617939 290 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 MIR6130-201ENST00000619419 109 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AL357559.1-201ENST00000622228 274 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC243312.2-201ENST00000623340 601 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 U6.105-201ENST00000637379 88 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AC090337.1-201ENST00000579651 2074 ntBASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 Y_RNA.255-201ENST00000364581 97 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 Y_RNA.367-201ENST00000365544 101 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNA5SP424-201ENST00000390988 115 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-1009P-201ENST00000390996 107 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 EI24P2-201ENST00000397776 1076 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNU4-65P-201ENST00000410473 140 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNA5SP107-201ENST00000411358 122 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 OR9R1P-201ENST00000412200 877 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC245054.1-201ENST00000420944 258 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC005094.1-201ENST00000440420 368 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RPL21P23-201ENST00000446654 460 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC126389.1-201ENST00000477436 290 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL163973.1-201ENST00000484753 577 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 PCBP2P3-201ENST00000509726 843 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC074250.1-201ENST00000511117 192 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 LRRC34P2-201ENST00000514850 553 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNA5SP401-201ENST00000515920 127 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-507P-201ENST00000516045 100 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 SNORD60.2-201ENST00000516883 86 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-64P-201ENST00000517119 105 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 FAM60DP-201ENST00000524174 632 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC015917.1-201ENST00000579654 510 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL035413.2-201ENST00000604801 525 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 SNORA62.6-201ENST00000606322 83 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 Y_RNA.804-201ENST00000615262 101 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL359314.1-201ENST00000616913 261 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 MIR7975-201ENST00000619350 68 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AC006504.8-201ENST00000621046 635 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AL136313.1-201ENST00000624804 202 ntBASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms