Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC034105.3-201ENST00000565294 442 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 MIR4474-201ENST00000579189 78 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 AP000860.1-201ENST00000605250 559 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 AC090970.3-201ENST00000612566 866 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 AL359880.1-201ENST00000621879 266 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 LRRC77P-213ENST00000637727 880 ntBASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HDAC9Q9UKV0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RPL7P26-201ENST00000333817 754 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU6-173P-201ENST00000364215 104 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU6-169P-201ENST00000365336 107 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNY3P13-201ENST00000365542 102 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 SNORA20.2-201ENST00000383922 131 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU6-637P-201ENST00000384050 107 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU6-754P-201ENST00000391166 107 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MTCO3P40-201ENST00000392516 676 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 CALM2P3-201ENST00000400429 449 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU4-55P-201ENST00000410731 137 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 HMGN1P24-201ENST00000412282 298 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 CCDC58P2-201ENST00000417131 366 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC119618.1-201ENST00000434191 222 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 SSXP4-201ENST00000451349 245 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC108059.3-201ENST00000456388 214 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU7-59P-201ENST00000459101 61 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RPS3AP50-201ENST00000487064 803 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC135721.1-201ENST00000497954 479 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 RNU6-314P-201ENST00000516574 104 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AP003072.2-201ENST00000527756 676 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 FAM60BP-201ENST00000578364 658 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MIR5004-201ENST00000579078 107 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 BDH2P1-201ENST00000602288 736 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AL391646.1-201ENST00000603860 190 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC103710.2-201ENST00000609912 942 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 MIR6130-201ENST00000619419 109 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AC006504.1-201ENST00000562493 3666 ntBASIC4.13□□□□□ -1.75
HDAC9Q9UKV0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 OR1S2-201ENST00000302592 978 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 MIR591-201ENST00000385290 95 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AL591034.1-201ENST00000407447 340 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 RNU6-516P-201ENST00000411381 104 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 SSXP9-201ENST00000417503 292 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 YPEL5P1-201ENST00000419731 367 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 RPL21P109-201ENST00000422213 475 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 USP9YP18-201ENST00000425912 695 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 MTCO1P39-201ENST00000426148 480 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 MTCO2P19-201ENST00000427513 598 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 RPL32P28-201ENST00000443577 397 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 RPS29P31-201ENST00000446147 164 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC013267.1-201ENST00000458227 267 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC019235.1-201ENST00000503847 207 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC010486.1-201ENST00000511793 424 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 APOOP4-201ENST00000513530 597 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC103783.1-201ENST00000520506 373 ntBASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC9Q9UKV0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms