Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 COX6CP3-201ENST00000580869 223 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AL136363.1-201ENST00000605349 337 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC245517.5-201ENST00000611529 162 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 uc_338.12-201ENST00000616344 181 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC006338.1-201ENST00000618453 749 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 RPL7P26-201ENST00000333817 754 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 RNY3P13-201ENST00000365542 102 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 SNORA54-201ENST00000384281 123 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL590002.1-201ENST00000406554 418 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC009237.5-201ENST00000414271 501 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 RPS3AP12-201ENST00000443616 753 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL136380.1-201ENST00000447970 162 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC007182.2-201ENST00000489251 402 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC009646.1-201ENST00000510455 318 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC010493.1-201ENST00000513479 292 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 SUB1P2-201ENST00000556401 297 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL133153.1-201ENST00000557756 303 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC234778.2-201ENST00000566241 354 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 KC877982.1-201ENST00000602313 470 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL158211.4-201ENST00000606988 584 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 AC007014.2-201ENST00000615581 479 ntBASIC3.38□□□□□ -1.87
SIX4Q9UIU6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX4Q9UIU6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.159-201ENST00000363674 87 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 SNORA51.2-201ENST00000364595 132 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 RNU6-169P-201ENST00000365336 107 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 MIR135A2-201ENST00000384854 100 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 MIR491-201ENST00000384877 84 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 RNU6-837P-201ENST00000391056 108 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 CIR1P3-201ENST00000405137 479 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AL353193.1-201ENST00000421444 268 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 HMGB1P12-201ENST00000438594 598 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 MTND1P9-201ENST00000453775 944 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 MTCO2P29-201ENST00000465212 189 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC105914.1-201ENST00000511798 226 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 SNORA70.24-201ENST00000517233 118 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AP000857.1-201ENST00000532151 543 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 XIAPP1-201ENST00000603162 600 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AC004908.2-201ENST00000609090 574 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 AL136313.1-201ENST00000624804 202 ntBASIC3.37□□□□□ -1.87
SIX4Q9UIU6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX4Q9UIU6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms