Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AP000484.1-201ENST00000620067 1252 ntBASIC2.55□□□□□ -2
CHRNA9Q9UGM1 AC079416.3-201ENST00000624479 549 ntBASIC2.55□□□□□ -2
CHRNA9Q9UGM1 U2.21-201ENST00000637295 81 ntBASIC2.55□□□□□ -2
CHRNA9Q9UGM1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA9Q9UGM1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA9Q9UGM1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
CHRNA9Q9UGM1 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
CHRNA9Q9UGM1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RNU6-157P-201ENST00000383957 107 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AL359634.1-202ENST00000404721 284 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 MTND1P28-201ENST00000435623 950 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 UBE2FP3-201ENST00000436366 524 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC004854.1-201ENST00000440356 349 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC005094.1-201ENST00000440420 368 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 GSTA11P-201ENST00000452866 669 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 MTATP6P7-201ENST00000453315 681 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RPL12P25-201ENST00000455592 494 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC128713.1-201ENST00000471495 306 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC008716.1-201ENST00000511084 513 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC023050.2-201ENST00000544968 387 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 MIR3200-201ENST00000580767 85 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AC007349.4-201ENST00000608114 532 ntBASIC2.54□□□□□ -2
CHRNA9Q9UGM1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.54□□□□□ -2
CHRNA9Q9UGM1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 U3.26-201ENST00000391236 204 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC023141.4-201ENST00000412031 328 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 MED14P1-201ENST00000430517 648 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 RPS27AP9-201ENST00000477681 438 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 RN7SL297P-201ENST00000483161 293 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 RPL9P33-201ENST00000484311 566 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC080014.1-201ENST00000496877 1201 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 SNORA31.3-201ENST00000516029 96 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 RNU5A-4P-201ENST00000516588 111 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AP004247.1-201ENST00000531556 1289 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 MTCO2P15-201ENST00000532655 656 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 RPS3AP4-201ENST00000555161 764 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 DUXAP1-201ENST00000556632 463 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC023043.3-201ENST00000593113 385 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC097468.3-201ENST00000607956 456 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AC005046.1-201ENST00000608515 625 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 DUSP12P1-201ENST00000612874 516 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AP002782.1-201ENST00000623107 614 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 AP002791.1-201ENST00000623291 381 ntBASIC2.53□□□□□ -2
CHRNA9Q9UGM1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CHRNA9Q9UGM1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2.01
CHRNA9Q9UGM1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 RNU6-778P-201ENST00000363269 103 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 RNA5SP88-201ENST00000365560 109 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 RNU6-769P-201ENST00000384407 104 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 RNU6-757P-201ENST00000410334 100 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 ISCA1P1-201ENST00000426679 387 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 AC055855.1-201ENST00000489563 579 ntBASIC2.52□□□□□ -2.01
CHRNA9Q9UGM1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms