Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-223P-201ENST00000362830 107 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP50-201ENST00000363731 107 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU1-39P-201ENST00000383897 165 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORA20.2-201ENST00000383922 131 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORA9-201ENST00000384215 133 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RPL7P60-201ENST00000397636 735 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL136372.1-201ENST00000403060 228 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MTATP6P4-201ENST00000427725 675 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AP000907.1-201ENST00000428428 510 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MTND3P23-201ENST00000431980 347 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL159987.2-201ENST00000432754 307 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC090774.1-201ENST00000435925 246 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 USP9YP15-201ENST00000442391 422 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-420P-201ENST00000458780 107 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC010493.1-201ENST00000513479 292 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC114781.4-201ENST00000513707 639 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-840P-201ENST00000517275 65 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC090572.1-201ENST00000519251 160 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC109635.3-201ENST00000529536 185 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL512360.1-201ENST00000555346 234 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL133153.1-201ENST00000557756 303 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC025678.1-201ENST00000567861 338 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007363.1-201ENST00000604736 620 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL353621.2-201ENST00000605340 133 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AP001330.5-201ENST00000607176 411 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008536.2-201ENST00000607284 349 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC103710.3-201ENST00000608157 948 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC093838.1-201ENST00000613014 469 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC002553.4-201ENST00000616896 331 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AL357559.1-201ENST00000622228 274 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR4275-201ENST00000636486 87 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR1321-201ENST00000637766 79 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 ZNF826P-207ENST00000622273 1910 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC116096.1-201ENST00000566804 2314 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORA72.1-201ENST00000363485 129 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR491-201ENST00000384877 84 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU2-37P-201ENST00000410695 177 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC138393.2-201ENST00000414742 246 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC068533.1-201ENST00000418542 415 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RPS15AP12-201ENST00000419498 388 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC012498.1-201ENST00000424037 437 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 USP12PX-201ENST00000432383 1057 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 TIMM9P1-201ENST00000436122 256 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC098614.3-201ENST00000438957 440 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 MTND4LP16-201ENST00000440828 295 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 SNRPEP8-201ENST00000442866 260 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AL136380.1-201ENST00000447970 162 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 FDX1P2-201ENST00000450769 375 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RPS4XP13-201ENST00000483219 789 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RPS15AP36-201ENST00000492022 382 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AP003034.1-201ENST00000534621 422 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 MED28P6-201ENST00000558776 231 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR5195-201ENST00000583555 115 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 KC877982.1-201ENST00000602313 470 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC012468.1-201ENST00000604888 430 ntBASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms