Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.70-201ENST00000362886 110 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 RPL32P23-201ENST00000397237 405 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 PPIAP31-201ENST00000405422 495 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 EEF1A1P40-201ENST00000412883 573 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC012498.1-201ENST00000424037 437 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC006466.1-201ENST00000438721 289 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 KC877373.1-201ENST00000479066 408 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 RPS15AP34-201ENST00000487776 387 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 SUMO2P6-201ENST00000505273 288 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.665-201ENST00000516177 98 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 RNA5SP49-201ENST00000516450 115 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 RNU6-143P-201ENST00000516942 93 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 TRAV28-201ENST00000557548 323 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC025253.1-201ENST00000613623 543 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC104260.1-201ENST00000616660 539 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 MIR7151-201ENST00000617477 60 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 Z99571.1-201ENST00000636677 394 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AL158163.1-201ENST00000603915 1649 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MKS1Q9NXB0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.05□□□□□ -1.76
MKS1Q9NXB0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC090740.1-201ENST00000623193 2262 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RNU1-18P-201ENST00000363062 164 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RNU6-82P-201ENST00000363970 107 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RNU6-715P-201ENST00000365204 103 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 SNORA4.3-201ENST00000365564 137 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.378-201ENST00000365652 113 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 SNORD70.1-201ENST00000391007 85 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC006011.1-201ENST00000442758 349 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AL590639.1-201ENST00000456484 337 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC004801.2-202ENST00000463559 283 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RN7SL354P-201ENST00000469282 294 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.654-201ENST00000497848 106 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC091951.2-201ENST00000500762 203 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC046134.1-201ENST00000514454 666 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RNU6-507P-201ENST00000516045 100 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RNA5SP290-201ENST00000517133 127 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC106782.4-201ENST00000568264 210 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 MIR4480-201ENST00000582492 71 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 MIR5684-201ENST00000585074 65 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC234771.5-201ENST00000600161 514 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AL357078.3-201ENST00000607528 618 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AC092807.2-201ENST00000609367 243 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AL136221.1-201ENST00000621449 509 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 AL512643.1-201ENST00000635735 524 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 ZNF285B-201ENST00000561698 1767 ntBASIC4.04□□□□□ -1.76
MKS1Q9NXB0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
MKS1Q9NXB0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 MTND4P12-201ENST00000498999 1377 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-767P-201ENST00000384132 107 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-393P-201ENST00000384475 107 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AP000567.1-201ENST00000406413 156 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-1148P-201ENST00000410992 104 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AL669831.1-202ENST00000428504 417 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RPL23AP1-201ENST00000428990 471 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 GTF2IP13-201ENST00000438487 386 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms