Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC52A3Q9NQ40 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
SLC52A3Q9NQ40 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC52A3Q9NQ40 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC52A3Q9NQ40 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 Y_RNA.1-201ENST00000352915 104 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 RNU4-12P-201ENST00000365233 139 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 Y_RNA.450-201ENST00000384198 113 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MIR218-2-201ENST00000385006 110 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 SNORD115-47-201ENST00000391226 86 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 RNU2-43P-201ENST00000410306 190 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC127391.1-201ENST00000411737 98 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MTND1P2-201ENST00000430604 821 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC000111.3-201ENST00000433478 193 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 USP9YP15-201ENST00000442391 422 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AL136380.1-201ENST00000447970 162 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC234778.2-201ENST00000566241 354 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 SNORA59B-202ENST00000578183 701 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AC011451.2-201ENST00000604303 598 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AP001330.4-201ENST00000604350 154 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AL022099.1-201ENST00000604551 712 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MIR98-201ENST00000606724 119 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 AL133173.2-201ENST00000614270 90 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 MIR3688-2-201ENST00000636963 87 ntBASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC52A3Q9NQ40 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 RNU6-169P-201ENST00000365336 107 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 RPS15AP12-201ENST00000419498 388 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 MTND4LP11-201ENST00000422184 280 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 TIMM9P3-201ENST00000428659 274 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 HMGN2P31-201ENST00000432430 273 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC002486.1-201ENST00000435098 391 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 MTATP6P23-201ENST00000440153 476 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL049830.2-201ENST00000480072 201 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC106707.2-201ENST00000484182 374 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 FCF1P8-201ENST00000510322 597 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC009646.1-201ENST00000510455 318 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL133153.1-201ENST00000557756 303 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 HMGB1P33-201ENST00000563485 527 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 KC877982.1-201ENST00000602313 470 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL161734.1-201ENST00000609720 557 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AC017083.3-201ENST00000609955 700 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 AL110115.1-201ENST00000614396 364 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms