Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 COX6CP5-201ENST00000527162 228 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC124947.2-202ENST00000552735 133 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AL132857.1-201ENST00000555180 708 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AL391261.3-201ENST00000557194 520 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC009712.1-201ENST00000564938 316 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 HMGN2P15-201ENST00000585707 270 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 BNIP3P22-201ENST00000593399 556 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AL158042.1-201ENST00000605338 460 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 MIR7515-201ENST00000637837 67 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC099063.3-201ENST00000642066 185 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC011477.1-204ENST00000623416 1325 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC106754.1-201ENST00000562632 1513 ntBASIC2.11□□□□□ -2.07
EXOSC4Q9NPD3 AC069528.2-201ENST00000624849 1991 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AL139276.1-201ENST00000311910 1001 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 RNU4-92P-201ENST00000363783 136 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-359P-201ENST00000365466 108 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 MIR196B-201ENST00000384852 84 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 MTCO2P8-201ENST00000412213 658 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC007064.1-201ENST00000412238 351 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC091390.3-201ENST00000426478 338 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AL356867.1-201ENST00000429623 299 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 MTND3P1-201ENST00000441336 220 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 RPL7P18-201ENST00000478965 734 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC091951.3-201ENST00000504093 246 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC104090.1-201ENST00000506341 1171 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC022447.3-201ENST00000506865 495 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC007115.1-201ENST00000546853 234 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC013470.4-201ENST00000619978 986 ntBASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
EXOSC4Q9NPD3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL137003.2-201ENST00000606924 2538 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 SNORA23-201ENST00000365128 182 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 MIR27B-201ENST00000385129 97 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC092047.1-201ENST00000424997 240 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 COX6CP12-201ENST00000446748 202 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 MTCO1P27-201ENST00000448269 226 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC104563.1-201ENST00000476147 376 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC024589.1-201ENST00000512207 263 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 MTCYBP43-201ENST00000513621 740 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 RN7SKP24-201ENST00000515888 284 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms