Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-397P-201ENST00000516226 104 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 Y_RNA.687-201ENST00000516558 91 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 IGLV3-26-201ENST00000520756 302 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 MIR548AC-201ENST00000585049 88 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC006023.2-201ENST00000609916 167 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 MIR1244-1-201ENST00000612829 85 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 AL159153.1-201ENST00000619688 317 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 MIR1244-3-201ENST00000635744 85 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 MIR1244-2-201ENST00000636449 85 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 MIR1244-4-202ENST00000636813 85 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC000123.3-201ENST00000624029 4975 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNA5SP52-201ENST00000362448 134 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RN7SKP115-201ENST00000363177 317 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 U8.8-201ENST00000365399 135 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNU1-44P-201ENST00000384453 163 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 Y_RNA.533-201ENST00000384596 114 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 LAP3P1-201ENST00000403648 294 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNU4-34P-201ENST00000410431 124 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNU6-121P-201ENST00000410525 99 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AL138785.1-201ENST00000425821 331 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AL451062.2-201ENST00000427515 271 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 LINC01399-202ENST00000458450 244 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RPL39P38-201ENST00000467018 153 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 RPL7P51-201ENST00000490532 749 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNU7-4P-201ENST00000516961 62 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 RNU6-111P-201ENST00000517179 105 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC022080.3-201ENST00000544433 482 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 MIR4273-201ENST00000582824 84 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC012433.1-201ENST00000588916 398 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AL731566.2-201ENST00000618971 317 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 SDR42E1P4-201ENST00000620894 481 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC091905.2-201ENST00000623143 306 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 MIR4275-201ENST00000636486 87 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 AC083843.2-201ENST00000568248 6253 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 MTND5P6-201ENST00000422338 1798 ntBASIC4.63□□□□□ -1.67
SSU72Q9NP77 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
SSU72Q9NP77 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSU72Q9NP77 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 RNA5SP455-201ENST00000365190 119 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 DPPA2P3-201ENST00000411853 655 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 AL590135.1-201ENST00000422215 156 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC079168.2-201ENST00000453977 416 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC023141.9-201ENST00000458734 412 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC010469.1-201ENST00000463864 576 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC069499.1-201ENST00000489433 509 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC025445.1-201ENST00000502728 300 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 GZMAP1-201ENST00000503054 631 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC008716.1-201ENST00000511084 513 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 APOOP4-201ENST00000513530 597 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 RNU6-138P-201ENST00000515952 107 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 IGKV2D-23-201ENST00000518179 286 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 MIR5701-3-201ENST00000578890 82 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 MIR5701-1-201ENST00000585138 82 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 BDH2P1-201ENST00000602288 736 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 IMMP1LP3-201ENST00000604197 224 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 AC034102.8-201ENST00000615146 484 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms