Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RPS15AP34-201ENST00000487776 387 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 EIF4EP3-201ENST00000498782 656 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AL133153.1-201ENST00000557756 303 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC034105.4-201ENST00000568304 277 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 MIR3117-201ENST00000584034 78 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 AC016717.2-201ENST00000609089 5141 ntBASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SLIRPQ9GZT3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 OR56A5-201ENST00000340110 738 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 Y_RNA.126-201ENST00000363382 111 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 SNORA38.1-201ENST00000364172 131 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AL591416.1-201ENST00000404015 867 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 Z82209.1-201ENST00000422141 2135 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 BPY2DP-201ENST00000422208 265 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 ELOCP14-201ENST00000428070 331 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 SNRPEP9-201ENST00000436794 238 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 ELOCP7-201ENST00000439968 331 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC233279.1-201ENST00000455300 423 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MTND4P1-201ENST00000457501 1466 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 snoU13.22-201ENST00000459428 104 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC008716.1-201ENST00000511084 513 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MTND5P13-201ENST00000513046 1079 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 RNA5SP290-201ENST00000517133 127 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR4509-3-201ENST00000578671 94 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR3158-1-201ENST00000583596 81 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR4509-2-201ENST00000583920 94 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR3616-201ENST00000584070 92 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC091057.3-201ENST00000602684 733 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC021171.1-201ENST00000603137 706 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC024220.1-201ENST00000603675 484 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC012468.1-201ENST00000604888 430 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AL592221.1-201ENST00000605266 382 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC080013.3-201ENST00000606839 578 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC135507.1-201ENST00000607214 561 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 MIR4509-1-201ENST00000618224 94 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AC068057.2-201ENST00000624047 895 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 U2.21-201ENST00000637295 81 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 AL445984.1-201ENST00000637834 659 ntBASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SLIRPQ9GZT3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 HSPE1P11-201ENST00000339579 310 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 MIR7-3-201ENST00000384898 110 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 MIR620-201ENST00000385232 95 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 UBA52P6-201ENST00000399822 382 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RNU2-49P-201ENST00000410666 184 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 HMGB1P11-201ENST00000413899 637 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC096649.2-201ENST00000416186 393 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC098831.1-201ENST00000440661 216 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 MTATP6P30-201ENST00000443540 664 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL671855.1-201ENST00000446875 1203 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RPL23AP7-203ENST00000449021 469 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 PRSS3P4-201ENST00000453323 162 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC010631.1-201ENST00000474150 156 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RPL23AP45-201ENST00000476406 468 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RPS27AP10-201ENST00000496103 208 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC105252.1-201ENST00000503089 286 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC104090.1-201ENST00000506341 1171 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms