Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR4644-201ENST00000579929 84 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AL138889.2-201ENST00000603883 242 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC106900.2-201ENST00000604994 317 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC091167.4-201ENST00000605079 184 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC092794.2-201ENST00000620933 563 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC244205.2-202ENST00000635781 342 ntBASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM54Q9BYV2 AC008568.2-201ENST00000623862 2313 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 Y_RNA.86-201ENST00000363020 111 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RNU4-66P-201ENST00000365199 138 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RNU6-14P-201ENST00000384630 106 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RNU6-550P-201ENST00000391057 101 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 UBE2V1P2-201ENST00000397758 440 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RNU4-6P-201ENST00000410804 122 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC080125.1-201ENST00000414888 684 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 ELOCP23-201ENST00000452014 332 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 HMGN2P7-201ENST00000456186 273 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC087588.1-201ENST00000462203 316 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 PPIAP15-201ENST00000479662 484 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 MTCYBP18-201ENST00000501056 747 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 Y_RNA.702-201ENST00000516843 96 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RANP9-201ENST00000519957 271 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 ATP5F1P5-201ENST00000526403 760 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 BNIP3P6-201ENST00000549284 499 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AL138976.2-201ENST00000563989 694 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC034102.8-201ENST00000615146 484 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 AC063943.3-201ENST00000615562 356 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 MIR6758-201ENST00000620653 63 ntBASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM54Q9BYV2 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
TRIM54Q9BYV2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM54Q9BYV2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
TRIM54Q9BYV2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM54Q9BYV2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 Y_RNA.231-201ENST00000364358 102 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RNU6-116P-201ENST00000384042 109 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RPL21P65-201ENST00000406094 466 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RPS12P24-201ENST00000412619 387 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC092809.3-201ENST00000415453 231 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC009161.1-201ENST00000417306 376 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 BTF3L4P3-201ENST00000418879 476 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MTND3P16-201ENST00000452205 344 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 CEACAMP4-201ENST00000457676 421 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RPL31P60-201ENST00000478450 367 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC091885.1-201ENST00000506658 268 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC098799.2-201ENST00000509466 868 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RN7SKP289-201ENST00000517244 295 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MTND4P7-201ENST00000523876 130 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC007687.1-201ENST00000602704 304 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AL591034.3-201ENST00000605511 685 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC022893.3-201ENST00000607665 437 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC107294.1-201ENST00000609524 467 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 MIR6867-201ENST00000610636 67 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 uc_338.34-201ENST00000617467 174 ntBASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM54Q9BYV2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms