Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-5P-201ENST00000384238 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-3P-201ENST00000384314 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-16P-201ENST00000384385 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-15P-201ENST00000384534 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-2-201ENST00000384627 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-29P-201ENST00000384637 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-9-201ENST00000384776 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-33P-201ENST00000384793 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AP000567.1-201ENST00000406413 156 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RPL17P36-201ENST00000420302 549 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 E2F6P2-201ENST00000420708 748 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RPL23AP82-202ENST00000427528 469 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RPL23AP1-201ENST00000428990 471 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC018644.1-201ENST00000429934 551 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AL645568.3-201ENST00000433683 316 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC006026.2-201ENST00000457376 180 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RPL26P9-201ENST00000457466 433 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 SNRPGP3-201ENST00000469405 227 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC005868.1-201ENST00000536421 331 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 HIGD1AP1-201ENST00000550979 275 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 LINC00933-203ENST00000559812 219 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AMZ2P1-203ENST00000565833 850 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 MIR4284-201ENST00000578924 81 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC008121.1-201ENST00000603244 268 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-6P-201ENST00000606623 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AL050343.2-201ENST00000607338 280 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 MIR8069-1-201ENST00000616627 86 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 PISRT1.1-201ENST00000616930 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 MIR8069-2-201ENST00000621412 86 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AC007256.1-201ENST00000392253 2765 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 MTND5P7-201ENST00000413558 1798 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 RNU6-384P-201ENST00000364900 104 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 MIR129-1-201ENST00000384972 72 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 RNU6-370P-201ENST00000411008 104 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 NDUFS5P4-201ENST00000412983 318 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 BTF3P15-201ENST00000455606 336 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 SNORD19B-201ENST00000459623 84 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 RN7SL354P-201ENST00000469282 294 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AL132838.2-201ENST00000492041 314 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC091868.1-201ENST00000508746 304 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 RN7SKP46-201ENST00000515942 234 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 RNU6-709P-201ENST00000517257 104 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC104576.1-201ENST00000524225 88 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC044792.1-201ENST00000593294 196 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC012531.5-201ENST00000611375 151 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC133104.2-201ENST00000615272 193 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC068831.7-201ENST00000616954 363 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 AC006111.3-201ENST00000622137 383 ntBASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAIPQ9BWF2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 SRP72P2-201ENST00000344851 1979 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RNU6-933P-201ENST00000384424 107 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RN7SKP267-201ENST00000410381 285 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 ELOCP19-201ENST00000411919 318 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RPL18P10-201ENST00000425606 538 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RPL7P28-201ENST00000437739 740 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AL031274.1-201ENST00000450334 232 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 HMGN2P7-201ENST00000456186 273 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 HMGN1P11-201ENST00000508668 303 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC092436.3-201ENST00000511788 257 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC108043.1-201ENST00000512696 574 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 RNU6-1170P-201ENST00000515974 106 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms